Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1863
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P...    30   3.1  
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P...    30   3.1  
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P...    30   3.1  
AE013599-1994|AAM68540.1|  461|Drosophila melanogaster CG30475-P...    29   7.1  

>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
            isoform B protein.
          Length = 4106

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 311  NFNWIRLFNCIRFFNCIRLFNCIKLLQELK 400
            + +++   N ++ FNC  L +C+KLLQ  K
Sbjct: 4040 HLDFVEDINFVQVFNCENLLSCLKLLQSRK 4069


>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
            isoform C protein.
          Length = 4061

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 311  NFNWIRLFNCIRFFNCIRLFNCIKLLQELK 400
            + +++   N ++ FNC  L +C+KLLQ  K
Sbjct: 3995 HLDFVEDINFVQVFNCENLLSCLKLLQSRK 4024


>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
            isoform A protein.
          Length = 4019

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 311  NFNWIRLFNCIRFFNCIRLFNCIKLLQELK 400
            + +++   N ++ FNC  L +C+KLLQ  K
Sbjct: 3953 HLDFVEDINFVQVFNCENLLSCLKLLQSRK 3982


>AE013599-1994|AAM68540.1|  461|Drosophila melanogaster CG30475-PA
           protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 297 NVGGDVQNSHGVHHHLIDQRIIFEE*LNVPIP 202
           +V G + N HG HH       I  E L +P+P
Sbjct: 391 SVLGTIHNGHGHHHQQYHHECIHYERLPIPVP 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,191,794
Number of Sequences: 53049
Number of extensions: 562643
Number of successful extensions: 1399
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)