Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1859X
(566 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphat... 35 0.23
L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphat... 35 0.23
BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein. 35 0.23
BC106715-1|AAI06716.1| 1505|Homo sapiens PTPRD protein protein. 35 0.23
BC106714-1|AAI06715.1| 1506|Homo sapiens PTPRD protein protein. 35 0.23
BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein. 35 0.23
AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine phosph... 35 0.23
AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine phosph... 35 0.23
AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine phosph... 35 0.23
AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine phosph... 35 0.23
AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine phosph... 35 0.23
AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine phosph... 35 0.23
AB208869-1|BAD92106.1| 1478|Homo sapiens protein tyrosine phosph... 35 0.23
Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin, j... 33 0.53
Z94055-2|CAI19944.1| 176|Homo sapiens tenascin R (restrictin, j... 33 0.53
Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin, j... 33 0.53
Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin) p... 33 0.53
X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein. 33 0.53
BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein. 33 0.53
AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein. 31 2.8
AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein. 31 2.8
Y00815-1|CAA68754.1| 1897|Homo sapiens put. LAR preprotein (AA -... 30 4.9
BX649182-1|CAE46200.1| 1103|Homo sapiens hypothetical protein pr... 30 4.9
BX640802-1|CAE45885.1| 1103|Homo sapiens hypothetical protein pr... 30 4.9
BC048768-1|AAH48768.1| 1898|Homo sapiens protein tyrosine phosph... 30 4.9
AL583862-10|CAI14894.1| 1907|Homo sapiens protein tyrosine phosp... 30 4.9
AL583862-9|CAI14895.1| 1898|Homo sapiens protein tyrosine phosph... 30 4.9
AB209478-1|BAD92715.1| 1552|Homo sapiens protein tyrosine phosph... 30 4.9
AB177857-1|BAD66835.1| 1918|Homo sapiens LAR protein. 30 4.9
BC132812-1|AAI32813.1| 1198|Homo sapiens FNDC3A protein protein. 30 6.5
AL137000-1|CAI39726.2| 1142|Homo sapiens fibronectin type III do... 30 6.5
AK056094-1|BAB71093.1| 417|Homo sapiens protein ( Homo sapiens ... 30 6.5
AJ749707-1|CAG44603.1| 1134|Homo sapiens human gene expressed in... 30 6.5
AJ749706-1|CAG44602.1| 1198|Homo sapiens human gene expressed in... 30 6.5
AB023187-1|BAA76814.2| 1151|Homo sapiens KIAA0970 protein protein. 30 6.5
Z99715-1|CAI19286.1| 1299|Homo sapiens tenascin N protein. 29 8.6
Z99297-1|CAI19966.1| 1299|Homo sapiens tenascin N protein. 29 8.6
U41725-1|AAD09360.1| 1502|Homo sapiens PTPsigma-(brain) protein. 29 8.6
U40317-1|AAC50567.1| 1911|Homo sapiens PTPsigma protein. 29 8.6
U35234-1|AAC50299.1| 1948|Homo sapiens protein tyrosine phosphat... 29 8.6
BC104812-1|AAI04813.1| 1501|Homo sapiens protein tyrosine phosph... 29 8.6
AL049689-1|CAB41260.1| 1294|Homo sapiens hypothetical protein pr... 29 8.6
AC005788-1|AAC62834.1| 1399|Homo sapiens PTPsigma [AA 524- 1926]... 29 8.6
AC005338-1|AAC27825.1| 475|Homo sapiens PTPsigma, partial CDS p... 29 8.6
AB209333-1|BAD92570.1| 1560|Homo sapiens protein tyrosine phosph... 29 8.6
>X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 1523
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 89 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 145
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 146 SWTPPRSDTIANYELVYK 163
>L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphatase
delta protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein.
Length = 1496
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 472 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 528
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 529 SWTPPRSDTIANYELVYK 546
>BC106715-1|AAI06716.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>BC106714-1|AAI06715.1| 1506|Homo sapiens PTPRD protein protein.
Length = 1506
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 468 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 524
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 525 SWTPPRSDTIANYELVYK 542
>AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine
phosphatase receptor type D protein.
Length = 1912
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 478 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 534
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 535 SWTPPRSDTIANYELVYK 552
>AB208869-1|BAD92106.1| 1478|Homo sapiens protein tyrosine
phosphatase, receptor type, D isoform 4 precursor
variant protein.
Length = 1478
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSE---PDETLNLTAMLLKEKRTSVHL 427
TI +L P ++ + A+ SI P + ++ ++ P + LN A E TS+ L
Sbjct: 451 TIGNLVPQKTYSVKVLAF-TSIGDGPLSSDIQVITQTGVPGQPLNFKAE--PESETSILL 507
Query: 428 AWDPPKGERYKNKELLYE 481
+W PP+ + N EL+Y+
Sbjct: 508 SWTPPRSDTIANYELVYK 525
>Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 1358
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 254 LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAW 433
+TIT+L PG+ NI + A ++I P T V + L + T+V + W
Sbjct: 380 VTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTI----TETTVEVQW 435
Query: 434 DP 439
+P
Sbjct: 436 EP 437
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWD 436
T+TDL PG + I A S P T++ R+E D +L M+ TS+ L W
Sbjct: 652 TLTDLVPGTEYGVGISAVMNSQQSVPATMNA--RTELDSPRDL--MVTASSETSISLIWT 707
Query: 437 PPKG 448
G
Sbjct: 708 KASG 711
>Z94055-2|CAI19944.1| 176|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 176
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 254 LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAW 433
+TIT+L PG+ NI + A ++I P T V + L + T+V + W
Sbjct: 104 VTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTI----TETTVEVQW 159
Query: 434 DP 439
+P
Sbjct: 160 EP 161
>Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 1358
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 254 LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAW 433
+TIT+L PG+ NI + A ++I P T V + L + T+V + W
Sbjct: 380 VTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTI----TETTVEVQW 435
Query: 434 DP 439
+P
Sbjct: 436 EP 437
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWD 436
T+TDL PG + I A S P T++ R+E D +L M+ TS+ L W
Sbjct: 652 TLTDLVPGTEYGVGISAVMNSQQSVPATMNA--RTELDSPRDL--MVTASSETSISLIWT 707
Query: 437 PPKG 448
G
Sbjct: 708 KASG 711
>Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin)
protein.
Length = 1358
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 254 LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAW 433
+TIT+L PG+ NI + A ++I P T V + L + T+V + W
Sbjct: 380 VTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTI----TETTVEVQW 435
Query: 434 DP 439
+P
Sbjct: 436 EP 437
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWD 436
T+TDL PG + I A S P T++ R+E D +L M+ TS+ L W
Sbjct: 652 TLTDLVPGTEYGVGISAVMNSQQSVPATMNA--RTELDSPRDL--MVTASSETSISLIWT 707
Query: 437 PPKG 448
G
Sbjct: 708 KASG 711
>X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein.
Length = 1358
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 254 LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAW 433
+TIT+L PG+ NI + A ++I P T V + L + T+V + W
Sbjct: 380 VTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTI----TETTVEVQW 435
Query: 434 DP 439
+P
Sbjct: 436 EP 437
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWD 436
T+TDL PG + I A S P T++ R+E D +L M+ TS+ L W
Sbjct: 652 TLTDLVPGTEYGVGISAVMNSQQSVPATMNA--RTELDSPRDL--MVTASSETSISLIWT 707
Query: 437 PPKG 448
G
Sbjct: 708 KASG 711
>BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein.
Length = 1257
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 254 LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAW 433
+TIT+L PG+ NI + A ++I P T V + L + T+V + W
Sbjct: 279 VTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTI----TETTVEVQW 334
Query: 434 DP 439
+P
Sbjct: 335 EP 336
Score = 31.9 bits (69), Expect = 1.6
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWD 436
T+TDL PG + I A S P T++ R+E D +L M+ TS+ L W
Sbjct: 551 TLTDLVPGTEYGVGISAVMNSQQSVPATMNA--RTELDSPRDL--MVTASSETSISLIWT 606
Query: 437 PPKG 448
G
Sbjct: 607 KASG 610
>AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein.
Length = 1909
Score = 31.1 bits (67), Expect = 2.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 486 CTSYNSSLFLYRSPLGGSQARCTEVRFSFSSIAVRFSVSSGSLRFL 349
C+ +SSL L RSP +A V F+ ++ V F+ +SG FL
Sbjct: 1098 CSVNSSSLLLCRSPAVPDRAHPQRVFFTLDNVQVDFASASGGQGFL 1143
>AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 486 CTSYNSSLFLYRSPLGGSQARCTEVRFSFSSIAVRFSVSSGSLRFL 349
C+ +SSL L RSP +A V F+ ++ V F+ +SG FL
Sbjct: 1101 CSVNSSSLLLCRSPAVPDRAHPQRVFFTLDNVQVDFASASGGQGFL 1146
>Y00815-1|CAA68754.1| 1897|Homo sapiens put. LAR preprotein (AA -16
to 1881) protein.
Length = 1897
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPF-TLSVKNRSE-PDETLNLTAMLLKEKRTSVHLA 430
T+ L PG+ ++ + A+ A G P T+ VK + P + + A + E T + L+
Sbjct: 464 TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV--ESDTRIQLS 521
Query: 431 WDPPKGERYKNKELLY 478
W P ER EL+Y
Sbjct: 522 WLLPPQERIIMYELVY 537
>BX649182-1|CAE46200.1| 1103|Homo sapiens hypothetical protein
protein.
Length = 1103
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 239 DTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEP-DETLNLTAML--LKEK 409
+T +T++DL PGV NI I A + + G P + + P +T+ L ++
Sbjct: 949 ETANSVTLSDLQPGVQYNITIYAVEENQEGTPVVIQQETTGTPRSDTVPSPRDLQFVEVT 1008
Query: 410 RTSVHLAWDPPK 445
V + W PP+
Sbjct: 1009 DVKVTIMWTPPE 1020
>BX640802-1|CAE45885.1| 1103|Homo sapiens hypothetical protein
protein.
Length = 1103
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 239 DTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEP-DETLNLTAML--LKEK 409
+T +T++DL PGV NI I A + + G P + + P +T+ L ++
Sbjct: 949 ETANSVTLSDLQPGVQYNITIYAVEENQEGTPVVIQQETTGTPRSDTVPSPRDLQFVEVT 1008
Query: 410 RTSVHLAWDPPK 445
V + W PP+
Sbjct: 1009 DVKVTIMWTPPE 1020
>BC048768-1|AAH48768.1| 1898|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1898
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPF-TLSVKNRSE-PDETLNLTAMLLKEKRTSVHLA 430
T+ L PG+ ++ + A+ A G P T+ VK + P + + A + E T + L+
Sbjct: 474 TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV--ESDTRIQLS 531
Query: 431 WDPPKGERYKNKELLY 478
W P ER EL+Y
Sbjct: 532 WLLPPQERIIMYELVY 547
>AL583862-10|CAI14894.1| 1907|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1907
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPF-TLSVKNRSE-PDETLNLTAMLLKEKRTSVHLA 430
T+ L PG+ ++ + A+ A G P T+ VK + P + + A + E T + L+
Sbjct: 474 TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV--ESDTRIQLS 531
Query: 431 WDPPKGERYKNKELLY 478
W P ER EL+Y
Sbjct: 532 WLLPPQERIIMYELVY 547
>AL583862-9|CAI14895.1| 1898|Homo sapiens protein tyrosine
phosphatase, receptor type, F protein.
Length = 1898
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPF-TLSVKNRSE-PDETLNLTAMLLKEKRTSVHLA 430
T+ L PG+ ++ + A+ A G P T+ VK + P + + A + E T + L+
Sbjct: 474 TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV--ESDTRIQLS 531
Query: 431 WDPPKGERYKNKELLY 478
W P ER EL+Y
Sbjct: 532 WLLPPQERIIMYELVY 547
>AB209478-1|BAD92715.1| 1552|Homo sapiens protein tyrosine
phosphatase, receptor type, F isoform 2 precursor
variant protein.
Length = 1552
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPF-TLSVKNRSE-PDETLNLTAMLLKEKRTSVHLA 430
T+ L PG+ ++ + A+ A G P T+ VK + P + + A + E T + L+
Sbjct: 130 TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV--ESDTRIQLS 187
Query: 431 WDPPKGERYKNKELLY 478
W P ER EL+Y
Sbjct: 188 WLLPPQERIIMYELVY 203
>AB177857-1|BAD66835.1| 1918|Homo sapiens LAR protein.
Length = 1918
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 TITDLPPGVVLNIDIQAYKASIYGEPF-TLSVKNRSE-PDETLNLTAMLLKEKRTSVHLA 430
T+ L PG+ ++ + A+ A G P T+ VK + P + + A + E T + L+
Sbjct: 494 TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEV--ESDTRIQLS 551
Query: 431 WDPPKGERYKNKELLY 478
W P ER EL+Y
Sbjct: 552 WLLPPQERIIMYELVY 567
>BC132812-1|AAI32813.1| 1198|Homo sapiens FNDC3A protein protein.
Length = 1198
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +2
Query: 233 GQDTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKR 412
G++TN +T+ DL P + + +QA SI G P + + + + +
Sbjct: 327 GEETN--ITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTK 384
Query: 413 TSVHLAWDPPKGERYKNKELLYE 481
S+ L W P K + + E
Sbjct: 385 NSLTLQWKAPSDNGSKIQNFVLE 407
>AL137000-1|CAI39726.2| 1142|Homo sapiens fibronectin type III
domain containing 3A protein.
Length = 1142
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +2
Query: 233 GQDTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKR 412
G++TN +T+ DL P + + +QA SI G P + + + + +
Sbjct: 271 GEETN--ITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTK 328
Query: 413 TSVHLAWDPPKGERYKNKELLYE 481
S+ L W P K + + E
Sbjct: 329 NSLTLQWKAPSDNGSKIQNFVLE 351
>AK056094-1|BAB71093.1| 417|Homo sapiens protein ( Homo sapiens
cDNA FLJ31532 fis, clone NT2RI2000597. ).
Length = 417
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 122 HGAPQLQRRVPRVAQDPRGRGLPRAGPA 205
H P Q +P +AQDP GRG P PA
Sbjct: 377 HPRPLCQVCLPLLAQDPGGRGYPLLWPA 404
>AJ749707-1|CAG44603.1| 1134|Homo sapiens human gene expressed in
odontoblast protein protein.
Length = 1134
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +2
Query: 233 GQDTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKR 412
G++TN +T+ DL P + + +QA SI G P + + + + +
Sbjct: 263 GEETN--ITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTK 320
Query: 413 TSVHLAWDPPKGERYKNKELLYE 481
S+ L W P K + + E
Sbjct: 321 NSLTLQWKAPSDNGSKIQNFVLE 343
>AJ749706-1|CAG44602.1| 1198|Homo sapiens human gene expressed in
odontoblast protein protein.
Length = 1198
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +2
Query: 233 GQDTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKR 412
G++TN +T+ DL P + + +QA SI G P + + + + +
Sbjct: 327 GEETN--ITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTK 384
Query: 413 TSVHLAWDPPKGERYKNKELLYE 481
S+ L W P K + + E
Sbjct: 385 NSLTLQWKAPSDNGSKIQNFVLE 407
>AB023187-1|BAA76814.2| 1151|Homo sapiens KIAA0970 protein protein.
Length = 1151
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +2
Query: 233 GQDTNE*LTITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKR 412
G++TN +T+ DL P + + +QA SI G P + + + + +
Sbjct: 280 GEETN--ITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTK 337
Query: 413 TSVHLAWDPPKGERYKNKELLYE 481
S+ L W P K + + E
Sbjct: 338 NSLTLQWKAPSDNGSKIQNFVLE 360
>Z99715-1|CAI19286.1| 1299|Homo sapiens tenascin N protein.
Length = 1299
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 260 ITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWDP 439
IT L PG I + + + G+P L+ R+E D N+ + E +V +WDP
Sbjct: 410 ITGLHPGTEYKITVVPMRGELEGKPILLN--GRTEIDSPTNVVTDRVTEDTATV--SWDP 465
>Z99297-1|CAI19966.1| 1299|Homo sapiens tenascin N protein.
Length = 1299
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 260 ITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWDP 439
IT L PG I + + + G+P L+ R+E D N+ + E +V +WDP
Sbjct: 410 ITGLHPGTEYKITVVPMRGELEGKPILLN--GRTEIDSPTNVVTDRVTEDTATV--SWDP 465
>U41725-1|AAD09360.1| 1502|Homo sapiens PTPsigma-(brain) protein.
Length = 1502
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 513 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 548
>U40317-1|AAC50567.1| 1911|Homo sapiens PTPsigma protein.
Length = 1911
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 513 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 548
>U35234-1|AAC50299.1| 1948|Homo sapiens protein tyrosine phosphatase
sigma protein.
Length = 1948
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 525 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 560
>BC104812-1|AAI04813.1| 1501|Homo sapiens protein tyrosine
phosphatase, receptor type, S protein.
Length = 1501
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 512 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 547
>AL049689-1|CAB41260.1| 1294|Homo sapiens hypothetical protein
protein.
Length = 1294
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 260 ITDLPPGVVLNIDIQAYKASIYGEPFTLSVKNRSEPDETLNLTAMLLKEKRTSVHLAWDP 439
IT L PG I + + + G+P L+ R+E D N+ + E +V +WDP
Sbjct: 405 ITGLHPGTEYKITVVPMRGELEGKPILLN--GRTEIDSPTNVVTDRVTEDTATV--SWDP 460
>AC005788-1|AAC62834.1| 1399|Homo sapiens PTPsigma [AA 524- 1926]
protein.
Length = 1399
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 2 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 37
>AC005338-1|AAC27825.1| 475|Homo sapiens PTPsigma, partial CDS
protein.
Length = 475
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 386 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 421
>AB209333-1|BAD92570.1| 1560|Homo sapiens protein tyrosine
phosphatase, receptor type, sigma isoform 3 precursor
variant protein.
Length = 1560
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 365 PDETLNLTAMLLKEKRTSVHLAWDPPKGERYKNKELLY 478
P + +NL A E TS+ L+W PP+ E ELL+
Sbjct: 538 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 573
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,149,049
Number of Sequences: 237096
Number of extensions: 1782445
Number of successful extensions: 4782
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4782
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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