Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1858X
         (526 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.      31   2.5  
AK000075-1|BAA90928.1|  387|Homo sapiens protein ( Homo sapiens ...    31   2.5  
AC004022-1|AAC35294.2|  387|Homo sapiens unknown protein.              31   2.5  
AM260536-1|CAJ97431.1| 1266|Homo sapiens ponsin protein.               29   10.0 
AL158826-4|CAI12827.1|  200|Homo sapiens surfeit 5 protein.            29   10.0 
AK095646-1|BAC04596.1|  844|Homo sapiens protein ( Homo sapiens ...    29   10.0 
AJ224639-3|CAA12053.1|  200|Homo sapiens Surf5b protein.               29   10.0 
AJ224359-1|CAA11916.1|  200|Homo sapiens surf5b protein.               29   10.0 

>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
          Length = 1253

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 432  IYQRRARPMYPECCSLRQPSYRSACWPEDWSRESR 328
            I++ R     P+ CS  Q S RS C P  W  +SR
Sbjct: 1078 IFRGRLENWTPKPCSTAQTSTRSPCMPFSWFNDSR 1112


>AK000075-1|BAA90928.1|  387|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20068 fis, clone COL01755. ).
          Length = 387

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 432 IYQRRARPMYPECCSLRQPSYRSACWPEDWSRESR 328
           I++ R     P+ CS  Q S RS C P  W  +SR
Sbjct: 151 IFRGRLENWTPKPCSTAQTSTRSPCMPFSWFNDSR 185


>AC004022-1|AAC35294.2|  387|Homo sapiens unknown protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 432 IYQRRARPMYPECCSLRQPSYRSACWPEDWSRESR 328
           I++ R     P+ CS  Q S RS C P  W  +SR
Sbjct: 151 IFRGRLENWTPKPCSTAQTSTRSPCMPFSWFNDSR 185


>AM260536-1|CAJ97431.1| 1266|Homo sapiens ponsin protein.
          Length = 1266

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 99   DRRSDEEQSGTRAEKHGGPELHHHKAR 179
            +R    EQ+G +A + GG +L HH  R
Sbjct: 1148 ERHRGGEQAGRKAARRGGSQLSHHSLR 1174


>AL158826-4|CAI12827.1|  200|Homo sapiens surfeit 5 protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 351 QANKQIYNLVDEGNSTQGTLAELVS-DIFKINHDYYGTAISTLAKNDI 491
           Q N+Q+  L +E +    TL + +S D++++  +YY ++ S    ND+
Sbjct: 100 QRNQQLRTLQEECDRKLITLRDEISIDLYELEEEYYSSSSSLCEANDL 147


>AK095646-1|BAC04596.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38327 fis, clone FCBBF3025073. ).
          Length = 844

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -1

Query: 160 SSGPPCFSALVPLCSSSDLRSSKGQLSNLPFGAYHCCTSVHLRSLPVL 17
           SS P   + LV   ++S++ S  GQ   +P  ++H C S+ LRS+  L
Sbjct: 395 SSVPASLAQLVTTSNASEVAS--GQKIAVPATSHHFCFSIDLRSIHAL 440


>AJ224639-3|CAA12053.1|  200|Homo sapiens Surf5b protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 351 QANKQIYNLVDEGNSTQGTLAELVS-DIFKINHDYYGTAISTLAKNDI 491
           Q N+Q+  L +E +    TL + +S D++++  +YY ++ S    ND+
Sbjct: 100 QRNQQLRTLQEECDRKLITLRDEISIDLYELEEEYYSSSSSLCEANDL 147


>AJ224359-1|CAA11916.1|  200|Homo sapiens surf5b protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 351 QANKQIYNLVDEGNSTQGTLAELVS-DIFKINHDYYGTAISTLAKNDI 491
           Q N+Q+  L +E +    TL + +S D++++  +YY ++ S    ND+
Sbjct: 100 QRNQQLRTLQEECDRKLITLRDEISIDLYELEEEYYSSSSSLCEANDL 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,326,782
Number of Sequences: 237096
Number of extensions: 1862371
Number of successful extensions: 7896
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7896
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)