Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1857
         (816 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.      31   5.0  
AK000075-1|BAA90928.1|  387|Homo sapiens protein ( Homo sapiens ...    31   5.0  
AC004022-1|AAC35294.2|  387|Homo sapiens unknown protein.              31   5.0  
M13903-1|AAA59186.1|  585|Homo sapiens involucrin protein.             31   6.6  
BC046391-1|AAH46391.1|  585|Homo sapiens involucrin protein.           31   6.6  
AL162596-4|CAI19553.1|  585|Homo sapiens involucrin protein.           31   6.6  

>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
          Length = 1253

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 432  IYQRRARPMYPECCSLRQPSYRSACWPEDWSRESR 328
            I++ R     P+ CS  Q S RS C P  W  +SR
Sbjct: 1078 IFRGRLENWTPKPCSTAQTSTRSPCMPFSWFNDSR 1112


>AK000075-1|BAA90928.1|  387|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20068 fis, clone COL01755. ).
          Length = 387

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 432 IYQRRARPMYPECCSLRQPSYRSACWPEDWSRESR 328
           I++ R     P+ CS  Q S RS C P  W  +SR
Sbjct: 151 IFRGRLENWTPKPCSTAQTSTRSPCMPFSWFNDSR 185


>AC004022-1|AAC35294.2|  387|Homo sapiens unknown protein.
          Length = 387

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 432 IYQRRARPMYPECCSLRQPSYRSACWPEDWSRESR 328
           I++ R     P+ CS  Q S RS C P  W  +SR
Sbjct: 151 IFRGRLENWTPKPCSTAQTSTRSPCMPFSWFNDSR 185


>M13903-1|AAA59186.1|  585|Homo sapiens involucrin protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -3

Query: 727 ERVASKHSLLKLSEQFGGRFGHVQLHQRAQLGPVETELLVEEQLHAGAGLERRV--LEGV 554
           E++  +   LK  EQ  G+  H++ HQ  QLG  E ++L  +QL    G  + +   EG 
Sbjct: 334 EQLEEQEGQLKHLEQQEGQLEHLE-HQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQ 392

Query: 553 LAADVRPRGQV 521
           L   V+  GQ+
Sbjct: 393 LKHLVQQEGQL 403


>BC046391-1|AAH46391.1|  585|Homo sapiens involucrin protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -3

Query: 727 ERVASKHSLLKLSEQFGGRFGHVQLHQRAQLGPVETELLVEEQLHAGAGLERRV--LEGV 554
           E++  +   LK  EQ  G+  H++ HQ  QLG  E ++L  +QL    G  + +   EG 
Sbjct: 334 EQLEEQEGQLKHLEQQEGQLEHLE-HQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQ 392

Query: 553 LAADVRPRGQV 521
           L   V+  GQ+
Sbjct: 393 LKHLVQQEGQL 403


>AL162596-4|CAI19553.1|  585|Homo sapiens involucrin protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -3

Query: 727 ERVASKHSLLKLSEQFGGRFGHVQLHQRAQLGPVETELLVEEQLHAGAGLERRV--LEGV 554
           E++  +   LK  EQ  G+  H++ HQ  QLG  E ++L  +QL    G  + +   EG 
Sbjct: 334 EQLEEQEGQLKHLEQQEGQLEHLE-HQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQ 392

Query: 553 LAADVRPRGQV 521
           L   V+  GQ+
Sbjct: 393 LKHLVQQEGQL 403


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,068,533
Number of Sequences: 237096
Number of extensions: 2618673
Number of successful extensions: 9968
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9968
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)