Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1856
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41624-7|AAF99946.3| 302|Caenorhabditis elegans Hypothetical pr... 34 0.12
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 33 0.28
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.28
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 33 0.28
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF144262-1|AAD37370.1| 289|Caenorhabditis elegans AP180-like ad... 33 0.28
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 33 0.28
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 31 0.65
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 0.86
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 1.1
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81539-6|CAB63201.2| 236|Caenorhabditis elegans Hypothetical pr... 30 2.0
U88308-18|AAK68217.1| 198|Caenorhabditis elegans Uncoordinated ... 30 2.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 29 2.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 29 3.5
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 6.0
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 6.0
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 8.0
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 8.0
>U41624-7|AAF99946.3| 302|Caenorhabditis elegans Hypothetical
protein F46C8.8 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 397 PTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAPSRTPVPTMI 576
PTP+P PR+ +L GG++ L S SS S G+ P+ P T
Sbjct: 145 PTPRPRPRQNLFGQFLGGGQAANSNALPSQQSSSQSAAGGNLLSLFGLM-PTPAPTTTTT 203
Query: 577 DQVGTICK-DTVDTPAAMPDPRRSRS 651
+ + K + P P P +S S
Sbjct: 204 TEASPVQKIMNMFVPQERPQPEQSSS 229
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +1
Query: 250 APLDHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTP-------- 405
AP A PD D +S A P+P + + + + + PT +P P
Sbjct: 376 APATSAAQPDLLDMFQSS----AAPAPQTADVTNPFGNFAAPSAFPTNVPPPAAHSAPFG 431
Query: 406 -QPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPG 510
QP+P+ +++P+Y ++P + +GH + G
Sbjct: 432 VQPAPQHSAAPFYANLHQAPPMQSQAPNGHQAAPFG 467
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.7 bits (71), Expect = 0.28
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 316 ARPSPGSTT---LEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSS 486
+ PSP ST + L + PSQ T S TSS T SP V S
Sbjct: 494 SEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTTMTSPSQSSSVGS 553
Query: 487 GHSSTSPGQGSWAHRVRTQAPSRTP 561
STSP + + + +Q ++TP
Sbjct: 554 SQGSTSPAASTTSGEMTSQGSTQTP 578
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.7 bits (71), Expect = 0.28
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 316 ARPSPGSTT---LEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSS 486
+ PSP ST + L + PSQ T S TSS T SP V S
Sbjct: 701 SEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTTMTSPSQSSSVGS 760
Query: 487 GHSSTSPGQGSWAHRVRTQAPSRTP 561
STSP + + + +Q ++TP
Sbjct: 761 SQGSTSPAASTTSGEMTSQGSTQTP 785
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.7 bits (71), Expect = 0.28
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 316 ARPSPGSTT---LEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSS 486
+ PSP ST + L + PSQ T S TSS T SP V S
Sbjct: 701 SEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTTMTSPSQSSSVGS 760
Query: 487 GHSSTSPGQGSWAHRVRTQAPSRTP 561
STSP + + + +Q ++TP
Sbjct: 761 SQGSTSPAASTTSGEMTSQGSTQTP 785
Score = 31.1 bits (67), Expect = 0.86
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +1
Query: 322 PSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTG-GKSPRYEQLVSSGHSS 498
P+P ST+ + + PSQ T +P S LT SP + S S
Sbjct: 855 PNP-STSSGSSMITQSPYPSQSTSPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQGS 913
Query: 499 TSPGQGSWAHRVRTQAPSRTPVPT--MIDQVGTICKDT 606
TSPG + + + +Q ++TP T + Q T+ T
Sbjct: 914 TSPGISTTSEEMTSQGSTQTPGSTGSTVTQPSTVSDST 951
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = -2
Query: 203 PAVSAGSPMALYQQKSFQASRASGWIEATVPGLCPRWPVPTRTRSGRSPTSLPLSTIGS 27
P+ S+GS M+ ++ Q+S+++ +E++ G P T + SP+ P STIGS
Sbjct: 978 PSTSSGSSMST---QTPQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSPSPSSTIGS 1033
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 379 SQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAPSRT 558
S P + P+P +S +T +SP Q S SST+P GS + + +PS +
Sbjct: 845 SSPAPSTSQNPNPSTSSGSSMIT--QSPYPSQSTSPVESSTTPSPGSPGTTLTSTSPSPS 902
Query: 559 PVPTM 573
T+
Sbjct: 903 QSTTI 907
>AF144262-1|AAD37370.1| 289|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +1
Query: 250 APLDHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTP-------- 405
AP A PD D +S A P+P + + + + + PT +P P
Sbjct: 79 APATSAAQPDLLDMFQSS----AAPAPQTADVTNPFGNFAAPSAFPTNVPPPAAHSAPFG 134
Query: 406 -QPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPG 510
QP+P+ +++P+Y ++P + +GH + G
Sbjct: 135 VQPAPQHSAAPFYANLHQAPPMQSQAPNGHQAAPFG 170
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +1
Query: 250 APLDHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTP-------- 405
AP A PD D +S A P+P + + + + + PT +P P
Sbjct: 376 APATSAAQPDLLDMFQSS----AAPAPQTADVTNPFGNFAAPSAFPTNVPPPAAHSAPFG 431
Query: 406 -QPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPG 510
QP+P+ +++P+Y ++P + +GH + G
Sbjct: 432 VQPAPQHSAAPFYANLHQAPPMQSQAPNGHQAAPFG 467
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 31.5 bits (68), Expect = 0.65
Identities = 32/117 (27%), Positives = 53/117 (45%)
Frame = +1
Query: 322 PSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSST 501
PS L +V S + L P+ T +P T +P + G +P+ +V S+
Sbjct: 1564 PSTEGEDLVNVELSAIPLDDHPSSSNT---APTTTIAP---SVGGAPKPTSVVVKSPSTR 1617
Query: 502 SPGQGSWAHRVRTQAPSRTPVPTMIDQVGTICKDTVDTPAAMPDPRRSRSAHGEHSR 672
S +G+ + V AP+ + ++ D+V ++ TVD PA P P S + SR
Sbjct: 1618 SRTRGAASESV-DDAPAEHSM-SLQDRVFSMFGSTVDAPAPPPPPPASAETNSRRSR 1672
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +1
Query: 310 GIARPSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSG 489
G RP PG+ + D +QP P+ P PR P G PR + ++ G
Sbjct: 349 GPQRPRPGTRPRGNPCDQC---SAQPNHCPSGPPGPRGRPGPPGFPGQDGPRGLRGLNGG 405
Query: 490 HSSTSP 507
+S P
Sbjct: 406 YSGVQP 411
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 334 STTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPGQ 513
STTL S+ G +R P+ P P T + + Q +S +ST PG+
Sbjct: 625 STTLHVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETST-PGE 683
Query: 514 GSWAHRVRTQAPSRT-PVPTMI 576
+ + T APS + P PT +
Sbjct: 684 PTSSTPSDTPAPSTSVPPPTSV 705
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/82 (35%), Positives = 35/82 (42%)
Frame = +1
Query: 322 PSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSST 501
PSPG + E S+LG PS P+P PSP + S+P L G S + S G S
Sbjct: 1397 PSPGPSPNEPSNPSILG-PSTGGD-PSPGPSPNEPSNPSIL--GPSTGGDP--SPGPSPN 1450
Query: 502 SPGQGSWAHRVRTQAPSRTPVP 567
P S PS P P
Sbjct: 1451 GPSNPSVPESSTGGGPSPGPAP 1472
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +1
Query: 250 APLDHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTS 429
+P D R +P RS + + S + T D+L L P+ T++ P +
Sbjct: 10 SPSDFRKSPV---DNRSFSCESPKSSGNAATSVDILSQLNFNPALLTQLSAAIARPMGIA 66
Query: 430 SPYY----LTGGKSPRYEQLVSSGHSSTSPGQGSW 522
SP + G P+ EQ+ SG S + G GS+
Sbjct: 67 SPLLDDLKVNFGSVPKIEQMDCSGGSFDTVGSGSF 101
>Z81539-6|CAB63201.2| 236|Caenorhabditis elegans Hypothetical
protein F46A8.8 protein.
Length = 236
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
Frame = +1
Query: 376 PSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTS--------PGQGSWA 525
P +P R P P P+P+ + L G P + G+ T PGQG W+
Sbjct: 78 PPRPPRPPRPVPTPKPVENMETLNGPFGPDVRYPIPGGYWDTGKVLRFYGVPGQGRWS 135
>U88308-18|AAK68217.1| 198|Caenorhabditis elegans Uncoordinated
protein 11, isoform f protein.
Length = 198
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = +1
Query: 316 ARPSPGSTTLEDVLDSLLGLPSQPTRIPTP---------QPSPRKTSSPYYLTGGKSPRY 468
A P+P + + + + + PT +P P QP+P+ +++P+Y ++P
Sbjct: 6 AAPAPQTADVTNPFGNFAAPSAFPTNVPPPAAHSAPFGVQPAPQHSAAPFYANLHQAPPM 65
Query: 469 EQLVSSGHSSTSPG 510
+ +GH + G
Sbjct: 66 QSQAPNGHQAAPFG 79
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +1
Query: 376 PSQPTRIPTPQPSPRKTS--SPYYLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAP 549
P+ PT++PT PS TS +P LT + SS + T+P + T P
Sbjct: 622 PTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNP-TSSTTAPTAPVNPTSPTTAPTVPP 680
Query: 550 SRTPVPTMIDQVGTICKDTVDTPAAMP 630
T PT T T T P
Sbjct: 681 VTTTTPTTTTSTTTTTTTTTTTTQTTP 707
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +1
Query: 376 PSQPTRIPTPQPSPRKTS--SPYYLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAP 549
P+ PT++PT PS TS +P LT + SS + T+P + T P
Sbjct: 678 PTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNP-TSSTTAPTAPVNPTSPTTAPTVPP 736
Query: 550 SRTPVPTMIDQVGTICKDTVDTPAAMP 630
T PT T T T P
Sbjct: 737 VTTTTPTTTTSTTTTTTTTTTTTQTTP 763
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/93 (23%), Positives = 35/93 (37%)
Frame = +1
Query: 280 WQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKS 459
+Q RS P ED+LD +G ++PT T P +T+ +L +
Sbjct: 12 FQKHNRSARNEFLGTHPTLPVPEDILDPFVGRSTRPTESLTEPPVATQTTQTVFLKPSDT 71
Query: 460 PRYEQLVSSGHSSTSPGQGSWAHRVRTQAPSRT 558
P Q +S+ S H + P R+
Sbjct: 72 P--NQDISALDKSVDHSHLHKDHSIHHPTPPRS 102
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 GIARPSPGSTTLEDVLDSLLGLPSQPT-RIPTPQPSPRKTSSPYYLTGGKSPRYEQLVS 483
G +R + S +ED+L +G+ ++PT R +P P P S + PR L+S
Sbjct: 47 GTSRQTLSSNEVEDILRQ-VGISTEPTVREESPAPPPGSHSDNHVDPSASHPRISNLLS 104
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/111 (26%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Frame = +1
Query: 247 VAPLDHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLG-LPSQPTRIPTPQPSPRK 423
VAP + TPD D+Q P+P + G PS+P + P
Sbjct: 520 VAPGNVEKTPDQTDNQVPETSHEMAPAPAPQPSPS--SPVYGPTPSEPAKPSMPSGESPA 577
Query: 424 TSSPYYLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAPSRTPVPTMI 576
P P Q SSG T+P S + + P VP MI
Sbjct: 578 QPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPNAIPEGPPPGPDVPVMI 628
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.5
Identities = 35/161 (21%), Positives = 58/161 (36%)
Frame = +1
Query: 259 DHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPY 438
D R DW + ++L+ G + D D + P + P PR+ +SP
Sbjct: 141 DDREDNDWTNRYKTLSNGRYTGPAREKAVRD--DRIPARALSPRKTP-----PRRNASPG 193
Query: 439 YLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAPSRTPVPTMIDQVGTICKDTVDTP 618
GG SP + S+G+ SP + R + +R P D D
Sbjct: 194 GDGGGGSPAARRGGSAGNRRRSPPRRGSPRRGSPRRDTRRSPPRRRGSPPARGGDRRDRR 253
Query: 619 AAMPDPRRSRSAHGEHSRRKSELFAQHSASVDRRNSLDAAA 741
R + E RR+ E +H + R+ ++ + A
Sbjct: 254 EDRRPVRDEKEREEESRRREIERKKRHEEAELRQKAIASVA 294
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +1
Query: 322 PSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSST 501
P P L+ + ++ GL S P P P P P P ++ GK P +S
Sbjct: 552 PPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP----PPSFMFNGKVPNAFSPGTSTSPVL 607
Query: 502 SPGQGSWAHRVRTQAPS---RTPVPTM-IDQVGTICKDTV 609
SPG A R Q + R P TM + GT+ D++
Sbjct: 608 SPGVVKSAVVYRKQKKTAFVRWPKLTMQMQDAGTVFNDSL 647
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +1
Query: 463 RYEQLVSSGHSSTSPGQGSWAHRVRTQAPSRTPVPTMIDQVGTICKDTVDTPAAM----P 630
R+ L + + S + A R R P I V ++ T +P+ + P
Sbjct: 19 RFTPLAKTKRTVVSRSRSRSASRARRSRSVGRPASRRIS-VRSVSTHTAKSPSLVVVISP 77
Query: 631 DPRRSRSAHGEHSRRKSELFAQHSASVDRRNS 726
PRR RS+ SRR S + + SV RR+S
Sbjct: 78 SPRRRRSSTSRSSRR-SVVRSASRGSVSRRSS 108
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 195 VCGESNGFVPTKELSSQQSF--WLDRGDGSRSMSPLAGSNP 79
VC E V T + S++ W+D DG++ S AG NP
Sbjct: 355 VCVEEKNDVMTMQALSEKDLCEWIDAMDGAKQNSYTAGENP 395
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 195 VCGESNGFVPTKELSSQQSF--WLDRGDGSRSMSPLAGSNP 79
VC E V T + S++ W+D DG++ S AG NP
Sbjct: 355 VCVEEKNDVMTMQALSEKDLCEWIDAMDGAKQNSYTAGENP 395
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 385 PTRIPTPQPSPRKTSSPYYLTGGKSPRYE 471
P+ PTP P P +SSP +SPR++
Sbjct: 172 PSSTPTPTPPPSSSSSPTPTPLRRSPRFQ 200
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 28.3 bits (60), Expect = 6.0
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Frame = +1
Query: 358 DSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSG--HSSTSPGQGSWAHR 531
D LL Q + +PT +P+ SP L G SP + S H TSP S +HR
Sbjct: 770 DELLTRSIQ-SEMPTSSSTPKMKVSPR-LNGFFSPTQKTTSSPAWSHPDTSPIPKSSSHR 827
Query: 532 V---RTQAPSRTPVPTMIDQVGTICKDTVDTPAAM-------PDPRRSRSAHGEHSRRKS 681
R Q S M + + K + +P P+P R + E + R+
Sbjct: 828 TQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQYLEPEPERRSHSKNEEADRRD 887
Query: 682 ELFAQHSASVDRRNSLDAA 738
A H S N +D A
Sbjct: 888 AFTASHEPS--DHNGIDVA 904
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 28.3 bits (60), Expect = 6.0
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Frame = +1
Query: 358 DSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSG--HSSTSPGQGSWAHR 531
D LL Q + +PT +P+ SP L G SP + S H TSP S +HR
Sbjct: 768 DELLTRSIQ-SEMPTSSSTPKMKVSPR-LNGFFSPTQKTTSSPAWSHPDTSPIPKSSSHR 825
Query: 532 V---RTQAPSRTPVPTMIDQVGTICKDTVDTPAAM-------PDPRRSRSAHGEHSRRKS 681
R Q S M + + K + +P P+P R + E + R+
Sbjct: 826 TQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQYLEPEPERRSHSKNEEADRRD 885
Query: 682 ELFAQHSASVDRRNSLDAA 738
A H S N +D A
Sbjct: 886 AFTASHEPS--DHNGIDVA 902
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 580 QVGTICKDTVDTPAAMPDPRRSRSAHGEHSRRKS 681
+V T K +V + RRS SAH HS+R S
Sbjct: 242 RVSTTTKTSVTETENVTTTRRSSSAHSTHSKRSS 275
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 580 QVGTICKDTVDTPAAMPDPRRSRSAHGEHSRRKS 681
+V T K +V + RRS SAH HS+R S
Sbjct: 242 RVSTTTKTSVTETENVTTTRRSSSAHSTHSKRSS 275
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical protein
C36A4.5 protein.
Length = 954
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 256 LDHRATPDWQDSQRSLNXGIARPSPGSTTLEDVLDSLLGLPSQPTRIPTPQPSPRKTSSP 435
+++RA ++ + +L+ + + S ++ L +P+ P + + +P K + P
Sbjct: 776 IENRAAVKYEKTDPALDAVLNACAQESEQIDASHPENLHMPAAPGSVASAKPV--KFARP 833
Query: 436 YYLTGGKSPRYEQLVSS 486
YY PRYE+L +S
Sbjct: 834 YYFDVVTVPRYEKLETS 850
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +1
Query: 373 LPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSGHSSTSPGQGSWAHRVRTQAPS 552
+PS T TP+PS SP +P ++S +STSP S R T A S
Sbjct: 300 VPSTTTSTTTPKPS-----SPSTAEASTTPVLTSNLTSALTSTSPLLASSTERTATTATS 354
Query: 553 RTPVP 567
P
Sbjct: 355 SVSTP 359
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 6.0
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Frame = +1
Query: 358 DSLLGLPSQPTRIPTPQPSPRKTSSPYYLTGGKSPRYEQLVSSG--HSSTSPGQGSWAHR 531
D LL Q + +PT +P+ SP L G SP + S H TSP S +HR
Sbjct: 768 DELLTRSIQ-SEMPTSSSTPKMKVSPR-LNGFFSPTQKTTSSPAWSHPDTSPIPKSSSHR 825
Query: 532 V---RTQAPSRTPVPTMIDQVGTICKDTVDTPAAM-------PDPRRSRSAHGEHSRRKS 681
R Q S M + + K + +P P+P R + E + R+
Sbjct: 826 TQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQYLEPEPERRSHSKNEEADRRD 885
Query: 682 ELFAQHSASVDRRNSLDAA 738
A H S N +D A
Sbjct: 886 AFTASHEPS--DHNGIDVA 902
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 301 LNXGIARPSPGSTTLEDVLDSLLGLPS-QPTRIPTPQPSPRK 423
++ IA PSP + +D + +L P P R PTP P PR+
Sbjct: 515 VSLAIATPSPEES--DDDQELILPSPEPSPVREPTPPPPPRE 554
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 8.0
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Frame = +1
Query: 310 GIARPSPGSTTLEDVLDSLLGLPSQPTRIP-------TPQPSPRKTSSPYYLTGGKSPRY 468
G + S TT + S LPSQ T + TP S +SP K P
Sbjct: 434 GTSLASTAVTTETSIGSSSTPLPSQSTSLSMSSLSTYTPSSSTAGATSPATQQSTK-PTI 492
Query: 469 EQLVSSGHSSTSPGQGSWAHRVRTQAPSRTPV 564
+SSG ++ +PG + + +++ PS T V
Sbjct: 493 GTSMSSGPTTVAPGASTESTVLQSSTPSGTTV 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,379
Number of Sequences: 27780
Number of extensions: 400019
Number of successful extensions: 1681
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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