Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1853
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006479-1|AAH06479.1| 176|Homo sapiens chromosome 19 open read... 82 3e-15
BC001080-1|AAH01080.1| 176|Homo sapiens chromosome 19 open read... 82 3e-15
AC005253-1|AAC25583.1| 183|Homo sapiens R26445_1 protein. 82 3e-15
AK222978-1|BAD96698.1| 178|Homo sapiens PEST-containing nuclear... 32 2.2
AB037675-1|BAB03501.1| 178|Homo sapiens PEST-containing nuclear... 32 2.2
BC094744-1|AAH94744.1| 949|Homo sapiens multimerin 2 protein. 30 8.9
BC064415-1|AAH64415.1| 578|Homo sapiens MMRN2 protein protein. 30 8.9
AK023527-1|BAB14599.1| 949|Homo sapiens protein ( Homo sapiens ... 30 8.9
>BC006479-1|AAH06479.1| 176|Homo sapiens chromosome 19 open reading
frame 50 protein.
Length = 176
Score = 81.8 bits (193), Expect = 3e-15
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +3
Query: 39 TAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 218
+A VF + MV+ DV II AQKNML RFEKT EML N N LS++RL+ S F
Sbjct: 6 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65
Query: 219 HTQLLFEMRKDLNSYLRKFGQLK 287
HT+ L EM++DL+S R+ LK
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLK 88
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 221 HTTT-VRNEEGFEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPS 388
HT T V + + IF++IR +K KL+ Q+PEA+ S + D++ + PS
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEE---DEDPIPPS 119
>BC001080-1|AAH01080.1| 176|Homo sapiens chromosome 19 open reading
frame 50 protein.
Length = 176
Score = 81.8 bits (193), Expect = 3e-15
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +3
Query: 39 TAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 218
+A VF + MV+ DV II AQKNML RFEKT EML N N LS++RL+ S F
Sbjct: 6 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65
Query: 219 HTQLLFEMRKDLNSYLRKFGQLK 287
HT+ L EM++DL+S R+ LK
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLK 88
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 221 HTTT-VRNEEGFEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPS 388
HT T V + + IF++IR +K KL+ Q+PEA+ S + D++ + PS
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEE---DEDPIPPS 119
>AC005253-1|AAC25583.1| 183|Homo sapiens R26445_1 protein.
Length = 183
Score = 81.8 bits (193), Expect = 3e-15
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +3
Query: 39 TAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 218
+A VF + MV+ DV II AQKNML RFEKT EML N N LS++RL+ S F
Sbjct: 13 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 72
Query: 219 HTQLLFEMRKDLNSYLRKFGQLK 287
HT+ L EM++DL+S R+ LK
Sbjct: 73 HTRTLVEMKRDLDSIFRRIRTLK 95
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 221 HTTT-VRNEEGFEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPS 388
HT T V + + IF++IR +K KL+ Q+PEA+ S + D++ + PS
Sbjct: 73 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEE---DEDPIPPS 126
>AK222978-1|BAD96698.1| 178|Homo sapiens PEST-containing nuclear
protein variant protein.
Length = 178
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 KKIRAIKTKLSSQYPEAYKEAVA-ESLANRKPLVDDEDLKPSEEKPESKM 412
KK AI KL S P+ +A ++L+ +DED +P E PE+KM
Sbjct: 81 KKASAISIKLGSSKPKETVPTLAPKTLSVAAAFNEDEDSEPEEMPPEAKM 130
>AB037675-1|BAB03501.1| 178|Homo sapiens PEST-containing nuclear
protein protein.
Length = 178
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 KKIRAIKTKLSSQYPEAYKEAVA-ESLANRKPLVDDEDLKPSEEKPESKM 412
KK AI KL S P+ +A ++L+ +DED +P E PE+KM
Sbjct: 81 KKASAISIKLGSSKPKETVPTLAPKTLSVAAAFNEDEDSEPEEMPPEAKM 130
>BC094744-1|AAH94744.1| 949|Homo sapiens multimerin 2 protein.
Length = 949
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 209 VQETHTTTVRNEEGFEFIFKKIRAIKTKLSSQYPEAYKEA 328
+ E H TT R EE ++ + +RA T+ + E Y E+
Sbjct: 380 LSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSES 419
>BC064415-1|AAH64415.1| 578|Homo sapiens MMRN2 protein protein.
Length = 578
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 209 VQETHTTTVRNEEGFEFIFKKIRAIKTKLSSQYPEAYKEA 328
+ E H TT R EE ++ + +RA T+ + E Y E+
Sbjct: 380 LSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSES 419
>AK023527-1|BAB14599.1| 949|Homo sapiens protein ( Homo sapiens
cDNA FLJ13465 fis, clone PLACE1003493, weakly similar to
ENDOTHELIAL CELL MULTIMERIN PRECURSOR. ).
Length = 949
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 209 VQETHTTTVRNEEGFEFIFKKIRAIKTKLSSQYPEAYKEA 328
+ E H TT R EE ++ + +RA T+ + E Y E+
Sbjct: 380 LSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSES 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,222,025
Number of Sequences: 237096
Number of extensions: 1835713
Number of successful extensions: 3632
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3631
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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