Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1851
(823 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S71381-1|AAB31085.1| 233|Homo sapiens prosome beta-subunit prot... 101 4e-21
D26600-1|BAA05647.1| 264|Homo sapiens proteasome subunit HsN3 p... 101 4e-21
CR456820-1|CAG33101.1| 264|Homo sapiens PSMB4 protein. 101 4e-21
BT006917-1|AAP35563.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC017486-1|AAH17486.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC017451-1|AAH17451.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC017307-1|AAH17307.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC012168-1|AAH12168.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC011768-1|AAH11768.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC010098-1|AAH10098.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC010088-1|AAH10088.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC008314-1|AAH08314.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
BC000331-1|AAH00331.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
AL589764-1|CAI16806.1| 264|Homo sapiens proteasome (prosome, ma... 101 4e-21
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 35 0.41
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 35 0.41
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 35 0.41
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 35 0.41
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 35 0.41
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 35 0.41
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 35 0.41
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 35 0.41
BX511262-6|CAM45797.1| 184|Homo sapiens HLA-B associated transc... 31 3.8
AL805934-9|CAO03657.1| 184|Homo sapiens HLA-B associated transc... 31 3.8
AL662847-67|CAO72105.1| 184|Homo sapiens HLA-B associated trans... 31 3.8
AL662801-51|CAM25592.1| 184|Homo sapiens HLA-B associated trans... 31 3.8
AL365360-3|CAI95313.1| 1317|Homo sapiens KIAA2026 protein. 31 6.7
AB095946-1|BAC23122.1| 858|Homo sapiens KIAA2026 protein protein. 31 6.7
>S71381-1|AAB31085.1| 233|Homo sapiens prosome beta-subunit
protein.
Length = 233
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 17 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 76
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 77 LKQVLGQMVIDEELLGDGHSYSP 99
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 100 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 159
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 160 AQPLLREVLEKQPVLSQTEARDLVERCMR 188
>D26600-1|BAA05647.1| 264|Homo sapiens proteasome subunit HsN3
protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>CR456820-1|CAG33101.1| 264|Homo sapiens PSMB4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BT006917-1|AAP35563.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC017486-1|AAH17486.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC017451-1|AAH17451.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC017307-1|AAH17307.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC012168-1|AAH12168.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC011768-1|AAH11768.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC010098-1|AAH10098.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC010088-1|AAH10088.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC008314-1|AAH08314.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>BC000331-1|AAH00331.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>AL589764-1|CAI16806.1| 264|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 4 protein.
Length = 264
Score = 101 bits (241), Expect = 4e-21
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +2
Query: 260 SPIXXXXXVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQY 439
+P+ V+GVKF+ G VIA D LGSYGSLARFR+ R+M VN+ +LG GDYADFQY
Sbjct: 48 NPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQY 107
Query: 440 LKDIIQQKIIDERCVGDGLQLKP 508
LK ++ Q +IDE +GDG P
Sbjct: 108 LKQVLGQMVIDEELLGDGHSYSP 130
Score = 101 bits (241), Expect = 4e-21
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +1
Query: 508 RSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYM 687
R++H WLTR +Y++RSKM+PLWN+ V+ G DGE FLG VD LG AYE ++ G GAY+
Sbjct: 131 RAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYL 190
Query: 688 ATPLLRDAVDKGP-LDQETAIAVVRKVWR 771
A PLLR+ ++K P L Q A +V + R
Sbjct: 191 AQPLLREVLEKQPVLSQTEARDLVERCMR 219
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTKIIEAR 99
Query: 464 I 466
+
Sbjct: 100 L 100
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 284 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMXVNDLILLGCGGDYADFQYLKDIIQQK 463
++ + + ++A DT S G RD P+ + D ++GC G + D L II+ +
Sbjct: 45 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 104
Query: 464 I 466
+
Sbjct: 105 L 105
>BX511262-6|CAM45797.1| 184|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 184
Score = 31.5 bits (68), Expect = 3.8
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 114 TMAFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFT--AHQRAPSRPPQLS 287
TM G PTP + P PG PG AS++APS V+ A P+ PP S
Sbjct: 40 TMTGNGTRPPPTPNAE-APPPG-----PGQASSVAPSSTNVESSAEGAPPPGPAPPPATS 93
Query: 288 SE--LSLTRDVLSPVT--HWARTGHW-PGFETVP 374
+ ++ + PV H G PGF T P
Sbjct: 94 HPRVIRISHQSVEPVVMMHMNIQGQQVPGFPTAP 127
>AL805934-9|CAO03657.1| 184|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 184
Score = 31.5 bits (68), Expect = 3.8
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 114 TMAFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFT--AHQRAPSRPPQLS 287
TM G PTP + P PG PG AS++APS V+ A P+ PP S
Sbjct: 40 TMTGNGTRPPPTPNAE-APPPG-----PGQASSVAPSSTNVESSAEGAPPPGPAPPPATS 93
Query: 288 SE--LSLTRDVLSPVT--HWARTGHW-PGFETVP 374
+ ++ + PV H G PGF T P
Sbjct: 94 HPRVIRISHQSVEPVVMMHMNIQGQQVPGFPTAP 127
>AL662847-67|CAO72105.1| 184|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 184
Score = 31.5 bits (68), Expect = 3.8
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 114 TMAFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFT--AHQRAPSRPPQLS 287
TM G PTP + P PG PG AS++APS V+ A P+ PP S
Sbjct: 40 TMTGNGTRPPPTPNAE-APPPG-----PGQASSVAPSSTNVESSAEGAPPPGPAPPPATS 93
Query: 288 SE--LSLTRDVLSPVT--HWARTGHW-PGFETVP 374
+ ++ + PV H G PGF T P
Sbjct: 94 HPRVIRISHQSVEPVVMMHMNIQGQQVPGFPTAP 127
>AL662801-51|CAM25592.1| 184|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 184
Score = 31.5 bits (68), Expect = 3.8
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 114 TMAFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFT--AHQRAPSRPPQLS 287
TM G PTP + P PG PG AS++APS V+ A P+ PP S
Sbjct: 40 TMTGNGTRPPPTPNAE-APPPG-----PGQASSVAPSSTNVESSAEGAPPPGPAPPPATS 93
Query: 288 SE--LSLTRDVLSPVT--HWARTGHW-PGFETVP 374
+ ++ + PV H G PGF T P
Sbjct: 94 HPRVIRISHQSVEPVVMMHMNIQGQQVPGFPTAP 127
>AL365360-3|CAI95313.1| 1317|Homo sapiens KIAA2026 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 132 DTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHQRAPSRPPQLSSELSLTRD 311
++++ PL SP F N GNAS+I Q + P PP +SLT
Sbjct: 1163 NSLSGQPLQHPLRSPTKFINSFGNASSIPTVHTSPQLINTTAKVPVPPP--VPTVSLTSV 1220
Query: 312 VLSPVTHWART 344
+ SP T A+T
Sbjct: 1221 IKSPATLLAKT 1231
>AB095946-1|BAC23122.1| 858|Homo sapiens KIAA2026 protein protein.
Length = 858
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 132 DTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHQRAPSRPPQLSSELSLTRD 311
++++ PL SP F N GNAS+I Q + P PP +SLT
Sbjct: 704 NSLSGQPLQHPLRSPTKFINSFGNASSIPTVHTSPQLINTTAKVPVPPP--VPTVSLTSV 761
Query: 312 VLSPVTHWART 344
+ SP T A+T
Sbjct: 762 IKSPATLLAKT 772
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,862,890
Number of Sequences: 237096
Number of extensions: 2934253
Number of successful extensions: 7311
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7301
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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