Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1850
(798 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 46 6e-05
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 46 6e-05
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 46 6e-05
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 46 6e-05
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 31 1.4
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB... 31 2.4
BT025811-1|ABF85711.1| 237|Drosophila melanogaster IP01956p pro... 29 7.4
AE013599-112|AAF57306.1| 237|Drosophila melanogaster CG14468-PA... 29 7.4
AY525767-1|AAS48649.1| 1538|Drosophila melanogaster ADAM metallo... 29 9.7
AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA... 29 9.7
AE014134-726|AAN10344.1| 618|Drosophila melanogaster CG17612-PB... 29 9.7
AE014134-725|AAF51023.1| 618|Drosophila melanogaster CG17612-PA... 29 9.7
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -1
Query: 756 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 598
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 369 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVA 253
+D++ + I NGYP + +D+G+ P R++ DK VA
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNG------PERITSDKYVA 2759
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -1
Query: 756 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 598
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 922 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 974
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 369 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVA 253
+D++ + I NGYP + +D+G+ P R++ DK VA
Sbjct: 966 NDFVAVEIVNGYPILTIDLGNG------PERITSDKYVA 998
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -1
Query: 756 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 598
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 369 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVA 253
+D++ + I NGYP + +D+G+ P R++ DK VA
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNG------PERITSDKYVA 2759
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -1
Query: 756 LQPRLPDTVDEMSTSTHVSAYFRTKEKDGFILYLGNPKGTMLRRTKSVCLKII 598
L+ + P+ ++T T++S YFRT E GF+LYLGN T + V ++I+
Sbjct: 2683 LELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIV 2735
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -1
Query: 369 DDYMVIGIQNGYPYVVMDIGDSSEPGQDPARVSIDKMVA 253
+D++ + I NGYP + +D+G+ P R++ DK VA
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNG------PERITSDKYVA 2759
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = +3
Query: 243 QRLSQPSC----QWRPSPDPGQVR------SCPRCPSLHTGIRSECRSPCSRPKKR*CEI 392
Q SQ SC + P+P+ G VR + +CPS H I ++C PC++ C +
Sbjct: 2103 QHHSQCSCPEGFEGNPTPEQGCVRVPAPCLASNQCPSGHMCIGNQCNLPCTKTAS--CAV 2160
Query: 393 LEIVLKCCECVTCVSVCFYDVRVLRSE 473
E +C + V C VC+ L E
Sbjct: 2161 GE---RCYQQV-CRKVCYTSNNCLAGE 2183
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 285 DPGQVRSCPRCPSLHTGIRSECRSPCSR 368
DP + S CP+ + S CRSPC R
Sbjct: 2434 DPNECLSDADCPASASCQNSRCRSPCER 2461
>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
isoform B protein.
Length = 1209
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 321 MDIGDSSEPGQDPARVSIDKMVATTAGTKSSLTGNSTEPRDK 196
MD GD + G+ A +D TTA K+ ++ ++TE K
Sbjct: 619 MDTGDGNSDGEKGAAAEVDLTTETTATAKTLVSSSTTEAMRK 660
>BT025811-1|ABF85711.1| 237|Drosophila melanogaster IP01956p
protein.
Length = 237
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 78 CGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARRSIYPWVL 212
CGR +D AS+N P G + CT G TA+ S Y W +
Sbjct: 143 CGRSSVVDYQTASSNRTWPIGSCCGKQNCT--GCTAKLSQYLWTI 185
>AE013599-112|AAF57306.1| 237|Drosophila melanogaster CG14468-PA
protein.
Length = 237
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 78 CGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARRSIYPWVL 212
CGR +D AS+N P G + CT G TA+ S Y W +
Sbjct: 143 CGRSSVVDYQTASSNRTWPIGSCCGKQNCT--GCTAKLSQYLWTI 185
>AY525767-1|AAS48649.1| 1538|Drosophila melanogaster ADAM
metalloprotease CG1964 protein.
Length = 1538
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 261 SCQWRPSPDPGQVRSCPRCPSLHTGIRSECRS 356
SCQ P P +++SC C L G S CRS
Sbjct: 834 SCQCIPGPQDDRIKSCELCCKL-PGEDSPCRS 864
>AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA
protein.
Length = 1537
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 261 SCQWRPSPDPGQVRSCPRCPSLHTGIRSECRS 356
SCQ P P +++SC C L G S CRS
Sbjct: 834 SCQCIPGPQDDRIKSCELCCKL-PGEDSPCRS 864
>AE014134-726|AAN10344.1| 618|Drosophila melanogaster CG17612-PB,
isoform B protein.
Length = 618
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 252 SQPSCQWRPSPDPGQVRSCPRCP 320
SQ Q+ S PGQ+ CP+CP
Sbjct: 495 SQVCVQFLRSKSPGQIFPCPKCP 517
>AE014134-725|AAF51023.1| 618|Drosophila melanogaster CG17612-PA,
isoform A protein.
Length = 618
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 252 SQPSCQWRPSPDPGQVRSCPRCP 320
SQ Q+ S PGQ+ CP+CP
Sbjct: 495 SQVCVQFLRSKSPGQIFPCPKCP 517
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,316,326
Number of Sequences: 53049
Number of extensions: 962669
Number of successful extensions: 3405
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3399
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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