Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1848
         (701 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   2.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   3.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 631 LYENPPRHQYTFPNSLATISYCITLIH 551
           L +NP      F N+ AT+S+C  +IH
Sbjct: 552 LLQNPKVSNEQFLNTAATLSFC-EMIH 577


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 616 EDSHTKCLLKCYFVLNKLLIK 678
           +D + KC LKC+   + +L K
Sbjct: 51  DDQNLKCYLKCFMTKHGILDK 71


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 117 FKYLGTRIVLCPQWACRG 170
           F+YLG R    P+W  RG
Sbjct: 306 FRYLGARGKKNPRWEFRG 323


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 463 EILVMPEIK*NLEINLMQ 516
           E LV+PEI+ NLE +L +
Sbjct: 258 EHLVVPEIEDNLETSLFR 275


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 583 LGNLEMYTDVAEDSHTKCLLKCYFVLNKLLIKWAY 687
           +GNL + +    D    CL+  +  +N LL  W +
Sbjct: 59  IGNLFLASLAIADLFVGCLVMTFAGVNDLLGYWVF 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,546
Number of Sequences: 438
Number of extensions: 4130
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)