Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1844X
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 160 7e-40
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 159 1e-39
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 159 1e-39
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 151 3e-37
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 107 7e-24
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 107 7e-24
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 105 2e-23
03_01_0034 + 318432-318825,318902-319851 104 5e-23
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 103 7e-23
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 103 7e-23
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 91 7e-19
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 82 3e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 70 1e-12
02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559,533... 31 0.77
06_03_0178 + 17594062-17595576 30 1.0
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544... 30 1.0
09_04_0412 + 17369935-17370873 29 1.8
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 29 3.1
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 3.1
01_03_0230 - 14004159-14004344,14004422-14004514,14004613-140046... 28 4.1
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 28 5.4
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 28 5.4
07_01_0284 - 2082249-2082256,2082496-2083009 27 7.2
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 27 7.2
03_04_0243 + 19298293-19299117 27 7.2
01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959 27 7.2
01_01_0834 + 6522709-6523452 27 7.2
09_01_0105 + 1668103-1668174,1668277-1668344,1668858-1669116 27 9.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 160 bits (388), Expect = 7e-40
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRAVFVDLEPTV+DEVRTG YRQLFHP+QLI+GKEDAANN+ARGHYTIGKEIVD+
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI KLAD CTGLQGFLVF++ GGGT
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGT 145
Score = 136 bits (328), Expect = 1e-32
Identities = 55/61 (90%), Positives = 60/61 (98%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 251 H 253
H
Sbjct: 61 H 61
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRA+FVDLEPTV+DEVRTG+YRQLFHP+QLI+GKEDAANN+ARGHYT+GKEIVD+
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDR+ KLAD CTGLQGFLVF++ GGGT
Sbjct: 119 LDRVRKLADNCTGLQGFLVFNAVGGGT 145
Score = 118 bits (285), Expect = 2e-27
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+HIGQAG+Q+GNACWELYCLEHGI+PDG MPSD T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 251 H 253
H
Sbjct: 61 H 61
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 159 bits (387), Expect = 1e-39
Identities = 73/87 (83%), Positives = 79/87 (90%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRAVFVDLEPTV+DEVRTG YRQLFHP+QLI GKEDAANN+ARGHYTIGKEIVD+
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLC 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI KLAD CTGLQGFLVF++ GGGT
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGT 145
Score = 133 bits (321), Expect = 1e-31
Identities = 54/61 (88%), Positives = 60/61 (98%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQ DGQMPSD+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 251 H 253
H
Sbjct: 61 H 61
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 151 bits (366), Expect = 3e-37
Identities = 66/87 (75%), Positives = 79/87 (90%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRA+FVDLEPTV+DEV+TG YRQLFHP+QLI+ KEDAANN+ARGHYT+G+E+VD+
Sbjct: 119 GKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLC 178
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDR+ KLAD CTGLQGFLVF++ GGGT
Sbjct: 179 LDRLRKLADNCTGLQGFLVFNAVGGGT 205
Score = 81.8 bits (193), Expect = 3e-16
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 187
MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 182 SDKTLGGGDDSFNTFFSETGAGKH 253
SD T G D+FNTFFSET +GKH
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKH 121
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 107 bits (256), Expect = 7e-24
Identities = 48/87 (55%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VRTG Y Q+F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 237 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 296
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF V HS GGGT
Sbjct: 297 LDVVRKEAENCDCLQGFQVCHSLGGGT 323
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 53 RKSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFS 232
+K KMRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 233 ETGAGK 250
E G+
Sbjct: 233 EASCGR 238
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 107 bits (256), Expect = 7e-24
Identities = 48/87 (55%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VRTG Y Q+F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF V HS GGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDL--QLERVNVYYNEASCGR 58
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 105 bits (252), Expect = 2e-23
Identities = 47/87 (54%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VR+G Y Q+F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF V HS GGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 104 bits (249), Expect = 5e-23
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VR+G Y +F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF V HS GGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 103 bits (248), Expect = 7e-23
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VR+G + Q+F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF V HS GGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHG+ G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 103 bits (248), Expect = 7e-23
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VR+G + Q+F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF V HS GGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 90.6 bits (215), Expect = 7e-19
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D VRTG Y Q+F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 424 LDRITKLADQCTGLQG 471
LD + K A+ C LQG
Sbjct: 117 LDVVRKEAENCDCLQG 132
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHGI P G+ + L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 81.8 bits (193), Expect = 3e-16
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 16/103 (15%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV +DLEP +D +R+G +F PD + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 424 LDRITKLADQCTGLQ----------------GFLVFHSFGGGT 504
LD + K A+ C LQ GF V HS GGGT
Sbjct: 117 LDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGT 159
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 251 H 253
H
Sbjct: 59 H 59
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKED--AANNYARGHYTIGKEIVDVVLD 429
PRA+ VDLEP V++ ++ YR L++ + + + A NN+A G++ G+++VD ++D
Sbjct: 62 PRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMD 120
Query: 430 RITKLADQCTGLQGFLVFHSFGGGT 504
I + AD L+GF++ HS GGT
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGT 145
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 74 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFF 229
RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
>02_01_0713 -
5332145-5332351,5332675-5332893,5334347-5334559,
5334637-5334730,5334860-5335020,5335114-5335315,
5335619-5335784,5336208-5336286
Length = 446
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 328 FHPDQLITGKEDAANNY---ARGHYTIGKEIVDVVLDRITKLADQCTGLQGFLVFHSFGG 498
+HPD+ + +E+A N + A + +G E V DR L + G G F+ FGG
Sbjct: 354 WHPDKNVDKREEAENMFREIAAAYEVLGDEDKRVRYDRGEDLDEMNMGGGGGGGFNPFGG 413
Query: 499 GTARIHITSDG 531
G + DG
Sbjct: 414 GGQQYTFHYDG 424
>06_03_0178 + 17594062-17595576
Length = 504
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 75 GNASPFTSVKPAYRLATPAGSCTASSMESSLMVRCRQIRPSAVETTPLTRSSARPAREST 254
G+ASP T A + A + ++ +++ SL R PSA TTP TR S P+ S
Sbjct: 435 GSASPRTFSPAAQKFVRNAIAKSSRTIDESLRASYRGTTPSA--TTPKTRFSRDPSLGSR 492
Query: 255 ATS 263
+ S
Sbjct: 493 SPS 495
>05_01_0609 +
5443780-5443875,5444540-5445136,5448792-5448881,
5449615-5450121
Length = 429
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 183 QIRPSAVETTPLTRSSARPARESTATSCLC*FGTNCSRRGSYRHLPSTVPP 335
++ PSA T P SA S AT + ++C +R LPST PP
Sbjct: 100 RLLPSAPSTWPAGAPSAGAPTPSPATWPSVKWSSDCLLELQHRRLPSTAPP 150
>09_04_0412 + 17369935-17370873
Length = 312
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 331 HPDQLITGKEDAANNYARGHYTIGKEIVDVVLDRITKLADQCTGLQGFLVFHSFGGGTAR 510
H D IT D A + G G + DV+L + + ++G ++ H F GG+
Sbjct: 140 HADDWITEHGDTARVFVAGDSAGGNIVHDVLLRASSNKGPR---IEGAIMLHPFFGGSTA 196
Query: 511 IHITSDGA 534
I SD A
Sbjct: 197 IDGESDEA 204
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 201 VETTPLTRSSARPARESTATSCLC*---FGTNCSRRGSYRHLPSTVPP 335
VE TP+ R S R R ST +S G+N +R S+R P ++PP
Sbjct: 58 VEDTPV-RESRRRRRASTTSSSAGGGGSAGSNTRKRRSWRQPPGSIPP 104
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 210 SSPPPRVLSDGI*PSGWIPCSRQYSSQ 130
S P P LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>01_03_0230 -
14004159-14004344,14004422-14004514,14004613-14004673,
14004761-14004874,14004955-14005206,14005293-14007037
Length = 816
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 328 TVDGKCRYEPRRLQLVPNQQRQLVAVLSRAGLAEERVKGVVSTAEG 191
T +GK +E LQ V N+ L + + +R K V+STA G
Sbjct: 114 TDEGKVSFEDPELQSVANKMENLSSSQKKGFFKPKRKKDVLSTALG 159
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 170 GQMPSDKTLGGGDDSFNTFF 229
GQMPS LGG FNT+F
Sbjct: 240 GQMPSTSRLGGKYHIFNTYF 259
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 6 RLGRAQTLFSSKSFF*ENLLTK*GNASPFTSVKPAYRLATPAGSCTASS 152
R G +F+S S + LT NA P ++ P+ RLA P SC+A++
Sbjct: 101 RTGSGPLIFTSCSSSATSPLT---NALPAGNICPSGRLAKPLSSCSAAA 146
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 243 APVSLKNVLKESSPPPRVLSDGI*PSGWIPCSRQYSSQQALPI 115
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 204 ETTPLTRSSARPARESTATS 263
+TTPLTRSS R R +T++S
Sbjct: 184 DTTPLTRSSRRAHRAATSSS 203
>03_04_0243 + 19298293-19299117
Length = 274
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +3
Query: 195 SAVETTPLTRSSARPARESTATSCLC*FGTNCSRRGSYRHLPSTVPPRSAHHWQRGCCQ* 374
+A+ T +R+SA PA S + CSR +T+ PR W+ G
Sbjct: 187 AAMAPTSWSRTSAPPASSSPTSPRRARSSLTCSRVAPSTPRSATLLPRQPRRWRPG---- 242
Query: 375 LCPRTLYHWQGDRRR 419
L R + G RR+
Sbjct: 243 LVARGRWEKDGRRRK 257
>01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959
Length = 220
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Frame = +2
Query: 149 EHGIQ-PDGQ-MPSDK-----TLGGGDDSFNTFFSETGAGKHG 256
EHG Q PDG PSDK +LGG D+ G G HG
Sbjct: 165 EHGKQAPDGSAQPSDKGATDGSLGGQGDNSQVVHGVQGDGAHG 207
>01_01_0834 + 6522709-6523452
Length = 247
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 241 RGKARPRAVFVDLEPT---VVDEVRTGTYRQLFHPDQLITGKEDAANNYARG 387
R +A R++ L+P V+D VR+G YR D+ + GK + RG
Sbjct: 112 RARAVARSLVSALQPEEVLVLDAVRSGAYRGRLAADEPVEGKLETRAARGRG 163
>09_01_0105 + 1668103-1668174,1668277-1668344,1668858-1669116
Length = 132
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 283 PTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDRITKL 444
P + + VR P +L +AA YA+ T+ KE+ V+D TK+
Sbjct: 38 PPIYEPVRIRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKM 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,231,279
Number of Sequences: 37544
Number of extensions: 376617
Number of successful extensions: 1245
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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