Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1844X
(536 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 5e-08
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 50 5e-08
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 50 5e-08
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 50 5e-08
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 50 5e-08
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 27 0.30
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 4.9
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 23 8.6
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 23 8.6
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 23 8.6
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.0 bits (114), Expect = 5e-08
Identities = 30/88 (34%), Positives = 37/88 (42%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRECISVH+GQAGVQIGN CW+ + P +
Sbjct: 1 MRECISVHVGQAGVQIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQAS 60
Query: 251 HGHELSLLIWNQL*STRFVPALTVNCST 334
IW++ S R PA T +CST
Sbjct: 61 TCPVPCSSIWSRPSSMRCAPARTASCST 88
Score = 33.9 bits (74), Expect = 0.003
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 114 RLATPAGSCTASSMESSLMVRCRQIRPSAVETTPLTRSSARPAREST 254
++ P CT SM S+ VRC + R S T T SS R A+ ST
Sbjct: 15 QIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQAST 61
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 50.0 bits (114), Expect = 5e-08
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +1
Query: 388 HYTIGKEIVDVVLDRITKLADQCTGLQGFLVFHSFGGGT 504
HYT G E+VD VLD + K + C LQGF + HS GGGT
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGT 39
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 50.0 bits (114), Expect = 5e-08
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +1
Query: 388 HYTIGKEIVDVVLDRITKLADQCTGLQGFLVFHSFGGGT 504
HYT G E+VD VLD + K + C LQGF + HS GGGT
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGT 39
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 50.0 bits (114), Expect = 5e-08
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +1
Query: 388 HYTIGKEIVDVVLDRITKLADQCTGLQGFLVFHSFGGGT 504
HYT G E+VD VLD + K + C LQGF + HS GGGT
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGT 39
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 50.0 bits (114), Expect = 5e-08
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +1
Query: 388 HYTIGKEIVDVVLDRITKLADQCTGLQGFLVFHSFGGGT 504
HYT G E+VD VLD + K + C LQGF + HS GGGT
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGT 39
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 27.5 bits (58), Expect = 0.30
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 185 LTASDHQAGFHARGSTAPSRRCQSVRRLDR--CERRCIPS-FCK 63
+ +D + ++ GS+ R C+++RR D C + C+ FC+
Sbjct: 56 IECTDPREVYNECGSSCDDRTCENIRRGDHLACTKHCVEGCFCR 99
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.4 bits (48), Expect = 4.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 325 VDGKCRYEPRRLQLVPNQQRQLVAVLSRAGLAEERVKGVVSTAE 194
V+ R L LVPN +RQ+V AEE + AE
Sbjct: 1391 VEESSRRAEEALNLVPNIERQIVNSRDLLQRAEEALYAASRNAE 1434
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 22.6 bits (46), Expect = 8.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 531 SIRSDVNPSRSTSERVKHEETLKPCA 454
S R+ V P R + E+ + E TLK A
Sbjct: 239 SERTFVTPKRESMEQAEQEWTLKQAA 264
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 22.6 bits (46), Expect = 8.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 531 SIRSDVNPSRSTSERVKHEETLKPCA 454
S R+ V P R + E+ + E TLK A
Sbjct: 239 SERTFVTPKRESMEQAEQEWTLKQAA 264
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 22.6 bits (46), Expect = 8.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 519 DVNPSRSTSERVKHEETLKPCALVSQLR 436
DV P+ + + LKPC L ++R
Sbjct: 319 DVTPAELITGIITERGVLKPCELAEKVR 346
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,638
Number of Sequences: 2352
Number of extensions: 12626
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -