Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1844X
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 165 2e-41
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 165 2e-41
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 165 2e-41
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 165 2e-41
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 161 2e-40
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 161 2e-40
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 161 2e-40
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 161 2e-40
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 158 3e-39
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 158 3e-39
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 158 3e-39
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 157 5e-39
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 155 2e-38
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 153 6e-38
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 151 2e-37
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 151 2e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 105 2e-23
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 103 8e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 99 2e-21
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 99 2e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 85 3e-17
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 85 3e-17
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 57 9e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 57 9e-09
Z81523-11|CAB04247.2| 403|Caenorhabditis elegans Hypothetical p... 31 0.69
Z81077-15|CAN99680.1| 664|Caenorhabditis elegans Hypothetical p... 29 2.8
Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical p... 29 2.8
Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 28 4.9
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 28 4.9
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 28 4.9
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 27 6.5
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 27 6.5
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 27 6.5
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 8.6
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 8.6
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 8.6
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 27 8.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV VDLEPTV+DE+RTGTYR LFHP+QLITGKEDAANNYARGHYTIGKEI+D+
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD CTGLQGFLVFHSFGGGT
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSFGGGT 145
Score = 128 bits (309), Expect = 2e-30
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 H 253
H
Sbjct: 61 H 61
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 165 bits (401), Expect = 2e-41
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV VDLEPTV+DE+RTGTYR LFHP+QLITGKEDAANNYARGHYTIGKEI+D+
Sbjct: 58 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 117
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD CTGLQGFLVFHSFGGGT
Sbjct: 118 LDRIRRLADNCTGLQGFLVFHSFGGGT 144
Score = 126 bits (304), Expect = 1e-29
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +2
Query: 74 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 253
RE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV VDLEPTV+DE+RTGTYR LFHP+QLITGKEDAANNYARGHYTIGKEI+D+
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD CTGLQGFLVFHSFGGGT
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSFGGGT 145
Score = 128 bits (309), Expect = 2e-30
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 H 253
H
Sbjct: 61 H 61
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PRAV VDLEPTV+DE+RTGTYR LFHP+QLITGKEDAANNYARGHYTIGKEI+D+
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLT 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD CTGLQGFLVFHSFGGGT
Sbjct: 119 LDRIRRLADNCTGLQGFLVFHSFGGGT 145
Score = 128 bits (309), Expect = 2e-30
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 H 253
H
Sbjct: 61 H 61
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 161 bits (392), Expect = 2e-40
Identities = 68/87 (78%), Positives = 81/87 (93%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTGTY++LFHP+Q+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD C+GLQGF VFHSFGGGT
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 102 bits (244), Expect = 2e-22
Identities = 44/61 (72%), Positives = 52/61 (85%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 161 bits (392), Expect = 2e-40
Identities = 68/87 (78%), Positives = 81/87 (93%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTGTY++LFHP+Q+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD C+GLQGF VFHSFGGGT
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 103 bits (248), Expect = 6e-23
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 161 bits (392), Expect = 2e-40
Identities = 68/87 (78%), Positives = 81/87 (93%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTGTY++LFHP+Q+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD C+GLQGF VFHSFGGGT
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 103 bits (248), Expect = 6e-23
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 161 bits (392), Expect = 2e-40
Identities = 68/87 (78%), Positives = 81/87 (93%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTGTY++LFHP+Q+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD C+GLQGF VFHSFGGGT
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 102 bits (244), Expect = 2e-22
Identities = 44/61 (72%), Positives = 52/61 (85%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 158 bits (383), Expect = 3e-39
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRA+FVDLEPTV+DEVRTGTY +LFHP+QLI+GKEDAANNYARGHYTIGKE++DVV
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVV 118
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
+DR+ +L ++C LQGFL+FHSFGGGT
Sbjct: 119 MDRVRRLTERCQSLQGFLIFHSFGGGT 145
Score = 108 bits (260), Expect = 2e-24
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE +S+HIGQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 251 H 253
H
Sbjct: 61 H 61
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 158 bits (383), Expect = 3e-39
Identities = 66/87 (75%), Positives = 79/87 (90%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTG Y++LFHP+Q+ITGKEDAANNYARGHYT+GKE++D
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD C+GLQGF VFHSFGGGT
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 102 bits (245), Expect = 1e-22
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 158 bits (383), Expect = 3e-39
Identities = 66/87 (75%), Positives = 79/87 (90%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTG Y++LFHP+Q+ITGKEDAANNYARGHYT+GKE++D
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LAD C+GLQGF VFHSFGGGT
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 102 bits (245), Expect = 1e-22
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 157 bits (381), Expect = 5e-39
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRA+ VDLEPT +DE+RTGTY+ LFHP+QL+TGKEDAANNYARGHYTIGKEI+DVV
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
+DR+ +L + C GLQGFLVFHSFGGGT
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGT 150
Score = 109 bits (261), Expect = 2e-24
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = +2
Query: 68 KMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 247
+ RE IS+H+GQAGVQ+GNACWELYCLEHGIQPDG + + +LG DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 248 KH 253
KH
Sbjct: 65 KH 66
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 155 bits (376), Expect = 2e-38
Identities = 65/87 (74%), Positives = 78/87 (89%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
G+ PR++FVDLEPTVVDE+RTG Y++LFHP+Q++TGKEDAANNYARGHYT+GKEI+D
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTT 115
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI +LA+ C GLQGF VFHSFGGGT
Sbjct: 116 LDRIRRLANNCEGLQGFFVFHSFGGGT 142
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/62 (67%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDG-QMPSDKTLGGGDDSFNTFFSETGAG 247
MRE IS+H+GQAGVQIGNACWELYCLEHGI PDG M D G S TFFS+TG G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPD----GNSGSLGTFFSDTGYG 56
Query: 248 KH 253
+H
Sbjct: 57 RH 58
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 153 bits (372), Expect = 6e-38
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRA++VDLEPTV+DE+R G Y LFHPDQ+I GKEDAANNYARGHYTIGKE++DVV
Sbjct: 62 GKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LDRI K + C GLQGFLVFHSFGGGT
Sbjct: 122 LDRIRKQTENCEGLQGFLVFHSFGGGT 148
Score = 77.8 bits (183), Expect = 5e-15
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +2
Query: 74 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 253
REC+S+HIGQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 151 bits (367), Expect = 2e-37
Identities = 65/87 (74%), Positives = 78/87 (89%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PR +FVDLEPTVVDEVRTGTYR LFHP+QL++GKEDAAN YARG YTIG+E++DVV
Sbjct: 65 GKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVV 124
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
+DR+ +LA+ C GLQGF++FHSFGGGT
Sbjct: 125 MDRVKRLAENCNGLQGFVIFHSFGGGT 151
Score = 95.5 bits (227), Expect = 2e-20
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = +2
Query: 74 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 253
RE IS+H+GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 151 bits (367), Expect = 2e-37
Identities = 65/87 (74%), Positives = 78/87 (89%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PR +FVDLEPTVVDEVRTGTYR LFHP+QL++GKEDAAN YARG YTIG+E++DVV
Sbjct: 37 GKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVV 96
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
+DR+ +LA+ C GLQGF++FHSFGGGT
Sbjct: 97 MDRVKRLAENCNGLQGFVIFHSFGGGT 123
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 137 LYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 253
++CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 39
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 105 bits (252), Expect = 2e-23
Identities = 50/87 (57%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRAV VDLEP +D VR+G + QLF PD + G+ A NN+A+GHYT G E+VD V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD I K A+ C LQGF + HS GGGT
Sbjct: 117 LDVIRKEAEGCDCLQGFQLTHSLGGGT 143
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG+ WE+ EHGIQPDG + L + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 105 bits (252), Expect = 2e-23
Identities = 50/87 (57%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRAV VDLEP +D VR+G + QLF PD + G+ A NN+A+GHYT G E+VD V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD I K A+ C LQGF + HS GGGT
Sbjct: 117 LDVIRKEAEGCDCLQGFQLTHSLGGGT 143
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG+ WE+ EHGIQPDG + L + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 105 bits (251), Expect = 3e-23
Identities = 49/87 (56%), Positives = 60/87 (68%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRAV VDLEP +D VR+G + QLF PD + G+ A NN+A+GHYT G E+VD V
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF + HS GGGT
Sbjct: 117 LDVVRKEAEGCDCLQGFQLTHSLGGGT 143
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG WE+ EHGIQPDG + L + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 103 bits (247), Expect = 8e-23
Identities = 48/87 (55%), Positives = 58/87 (66%)
Frame = +1
Query: 244 GKARPRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVV 423
GK PRA VDLEP +D VR G + QLF PD + G+ A NN+A+GHYT G E+VD V
Sbjct: 57 GKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Query: 424 LDRITKLADQCTGLQGFLVFHSFGGGT 504
LD + K A+ C LQGF + HS GGGT
Sbjct: 117 LDVVRKEAESCDCLQGFQMTHSLGGGT 143
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ EHGI P G D L + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDRI 435
PRAV VDLEP +D VR+G + QLF PD + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 436 TKLADQCTGLQGFLVFHSFGGGT 504
K A+ LQGF + HS GGGT
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGT 143
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ EHGI P GQ D L + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDRI 435
PRAV VDLEP +D VR+G + QLF PD + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 436 TKLADQCTGLQGFLVFHSFGGGT 504
K A+ LQGF + HS GGGT
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGT 143
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ EHGI P GQ D L + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDRI 435
PRA+ VDL+P ++ VR+ Y +LF P+ ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 436 TKLADQCTGLQGFLVFHSFGGGT 504
+ A+ L+GF + HS GGGT
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGT 143
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
M+E I+V +GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.0 bits (201), Expect = 3e-17
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDRI 435
PRA+ VDL+P ++ VR+ Y +LF P+ ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 436 TKLADQCTGLQGFLVFHSFGGGT 504
+ A+ L+GF + HS GGGT
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGT 143
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 71 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 250
M+E I+V +GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 251 H 253
+
Sbjct: 59 Y 59
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 56.8 bits (131), Expect = 9e-09
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEV-RTGTYRQLFHPDQLITGKED--AANNYARGHYTIGKEIVDVVL 426
PRAV VDLEP V++ + ++ + LF+ D + A NN+A G Y G+E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 427 DRITKLADQCTGLQGFLVFHSFGGGT 504
D I + A+ L G L HS GGT
Sbjct: 122 DIIIREAENTNNLDGILFTHSVSGGT 147
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 83 ISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDD 211
++VH+GQ G Q+ A W+ EHGI GQ + + D
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKD 50
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 56.8 bits (131), Expect = 9e-09
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEV-RTGTYRQLFHPDQLITGKED--AANNYARGHYTIGKEIVDVVL 426
PRAV VDLEP V++ + ++ + LF+ D + A NN+A G Y G+E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 427 DRITKLADQCTGLQGFLVFHSFGGGT 504
D I + A+ L G L HS GGT
Sbjct: 122 DIIIREAENTNNLDGILFTHSVSGGT 147
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 83 ISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDD 211
++VH+GQ G Q+ A W+ EHGI GQ + + D
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKD 50
>Z81523-11|CAB04247.2| 403|Caenorhabditis elegans Hypothetical
protein F32H2.7 protein.
Length = 403
Score = 30.7 bits (66), Expect = 0.69
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +3
Query: 84 SPFTSVKPAYRLATPAGSC----TASSMESSLMVRCRQIRPSAVE-TTPLTRSS 230
SP T V A +ATP+GSC TA +ES +R Q +AVE T ++RSS
Sbjct: 334 SPTTGVLTAQSIATPSGSCQSVFTAKEIES---IRSSQDVLTAVEILTDMSRSS 384
>Z81077-15|CAN99680.1| 664|Caenorhabditis elegans Hypothetical
protein F36A2.1d protein.
Length = 664
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 300 GSYRHLPSTV--PPRSAHHWQRGCCQ*LCPRTLYHWQGDRRRSFGQDH--EAG*PMHRAS 467
G Y +T PP H +Q+ Q + YH GDRR G+D+ + R S
Sbjct: 561 GQYHQQKNTYCQPPPQHHQYQQQSQQSHGYSSDYH-SGDRRDDRGRDNYQNSRYDDRRGS 619
Query: 468 GFP-RVSLVRRWNGSDSHH 521
P RW GS SHH
Sbjct: 620 SAPYNNQRGDRWRGSGSHH 638
>Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical
protein F36A2.1c protein.
Length = 662
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 300 GSYRHLPSTV--PPRSAHHWQRGCCQ*LCPRTLYHWQGDRRRSFGQDH--EAG*PMHRAS 467
G Y +T PP H +Q+ Q + YH GDRR G+D+ + R S
Sbjct: 559 GQYHQQKNTYCQPPPQHHQYQQQSQQSHGYSSDYH-SGDRRDDRGRDNYQNSRYDDRRGS 617
Query: 468 GFP-RVSLVRRWNGSDSHH 521
P RW GS SHH
Sbjct: 618 SAPYNNQRGDRWRGSGSHH 636
>Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical
protein F36A2.1b protein.
Length = 656
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 300 GSYRHLPSTV--PPRSAHHWQRGCCQ*LCPRTLYHWQGDRRRSFGQDH--EAG*PMHRAS 467
G Y +T PP H +Q+ Q + YH GDRR G+D+ + R S
Sbjct: 553 GQYHQQKNTYCQPPPQHHQYQQQSQQSHGYSSDYH-SGDRRDDRGRDNYQNSRYDDRRGS 611
Query: 468 GFP-RVSLVRRWNGSDSHH 521
P RW GS SHH
Sbjct: 612 SAPYNNQRGDRWRGSGSHH 630
>Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical
protein F36A2.1a protein.
Length = 658
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 300 GSYRHLPSTV--PPRSAHHWQRGCCQ*LCPRTLYHWQGDRRRSFGQDH--EAG*PMHRAS 467
G Y +T PP H +Q+ Q + YH GDRR G+D+ + R S
Sbjct: 555 GQYHQQKNTYCQPPPQHHQYQQQSQQSHGYSSDYH-SGDRRDDRGRDNYQNSRYDDRRGS 613
Query: 468 GFP-RVSLVRRWNGSDSHH 521
P RW GS SHH
Sbjct: 614 SAPYNNQRGDRWRGSGSHH 632
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 62 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPS-DKT 193
+Y R I +AG + +C CLE G++PD P DKT
Sbjct: 86 NYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 62 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPS-DKT 193
+Y R I +AG + +C CLE G++PD P DKT
Sbjct: 86 NYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 62 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPS-DKT 193
+Y R I +AG + +C CLE G++PD P DKT
Sbjct: 86 NYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 26 AFFF*VVFLRKSSYKM--RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLG 199
AFF V L KS + R+ +VH QI +C CL +G++P G P +
Sbjct: 34 AFFRRTVALTKSFKCITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIE 91
Query: 200 GGDDSFNTFFSETG 241
G FF+++G
Sbjct: 92 TG----RAFFTKSG 101
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 26 AFFF*VVFLRKSSYKM--RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLG 199
AFF V L KS + R+ +VH QI +C CL +G++P G P +
Sbjct: 52 AFFRRTVALTKSFKCITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIE 109
Query: 200 GGDDSFNTFFSETG 241
G FF+++G
Sbjct: 110 TG----RAFFTKSG 119
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 26 AFFF*VVFLRKSSYKM--RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLG 199
AFF V L KS + R+ +VH QI +C CL +G++P G P +
Sbjct: 34 AFFRRTVALTKSFKCITGRDDCNVHYSMH--QICRSCRHKKCLSNGMKPGGVQPKKPNIE 91
Query: 200 GGDDSFNTFFSETG 241
G FF+++G
Sbjct: 92 TG----RAFFTKSG 101
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPDQLITGKEDAANNYARGHYTIGKEIVDVVLDR 432
VV +++TG + P++ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 254 GHELSLLIWNQL*STRFVPALTVNCSTPISSSLAKRMLPITMP 382
GH L L+ NQL + PALT + + PI + +P T+P
Sbjct: 126 GHSLCLICCNQLLFSS-PPALTSHLNRPIPRMGISQRVPSTLP 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,803,249
Number of Sequences: 27780
Number of extensions: 279964
Number of successful extensions: 920
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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