Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1843X
         (368 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p pro...    48   4e-06
AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA...    48   4e-06
AE014298-850|AAF46130.1|  553|Drosophila melanogaster CG3599-PA ...    29   1.9  
U34925-2|AAC46881.1| 2354|Drosophila melanogaster MEI-41 protein.      28   4.4  
AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.    28   4.4  
AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA...    28   4.4  

>AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p
           protein.
          Length = 491

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 19/34 (55%), Positives = 29/34 (85%)
 Frame = +3

Query: 261 VLQGGEDVNHYDTDVHYVFRQDAYFTWV*GVREP 362
           +L+GG+D + Y+TDV YVFRQ++YF ++ GV+EP
Sbjct: 46  LLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEP 79


>AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA
           protein.
          Length = 491

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 19/34 (55%), Positives = 29/34 (85%)
 Frame = +3

Query: 261 VLQGGEDVNHYDTDVHYVFRQDAYFTWV*GVREP 362
           +L+GG+D + Y+TDV YVFRQ++YF ++ GV+EP
Sbjct: 46  LLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEP 79


>AE014298-850|AAF46130.1|  553|Drosophila melanogaster CG3599-PA
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 127 LPLNGLKKYQYVIKLWWGYKTDYMSFD 47
           LP +G K Y+Y I ++WG +T  +  D
Sbjct: 371 LPSSGAKSYRYRIGVYWGNETTVIGVD 397


>U34925-2|AAC46881.1| 2354|Drosophila melanogaster MEI-41 protein.
          Length = 2354

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 195  HFKSARAHRPRRC 157
            HFKSA+AHR +RC
Sbjct: 1900 HFKSAKAHRIKRC 1912


>AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.
          Length = 2517

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 195  HFKSARAHRPRRC 157
            HFKSA+AHR +RC
Sbjct: 2063 HFKSAKAHRIKRC 2075


>AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA
            protein.
          Length = 2517

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 195  HFKSARAHRPRRC 157
            HFKSA+AHR +RC
Sbjct: 2063 HFKSAKAHRIKRC 2075


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,811,257
Number of Sequences: 53049
Number of extensions: 324935
Number of successful extensions: 683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)