Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1843X
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   0.66 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   0.66 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   2.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   2.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   2.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   2.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   3.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 100 QYVIKLWWGYKTDYMSF 50
           QY  ++W GYK D  SF
Sbjct: 631 QYNSRIWGGYKFDKRSF 647


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 100 QYVIKLWWGYKTDYMSF 50
           QY  ++W GYK D  SF
Sbjct: 631 QYNSRIWGGYKFDKRSF 647


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 238 YLLIFVGLLRTKITALQ 188
           YLL+F+GL    +T +Q
Sbjct: 247 YLLVFIGLQSLSLTNIQ 263


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 115 GLKKYQYVIKLWWGYK 68
           G+ + + ++ +WW YK
Sbjct: 60  GIHRKKVLLSVWWDYK 75


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 115 GLKKYQYVIKLWWGYK 68
           G+ + + ++ +WW YK
Sbjct: 182 GIHRKKVLLSVWWDYK 197


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 88  KLWWGYKTDYMSFD 47
           K WW  K   +SFD
Sbjct: 365 KWWWNMKISNLSFD 378


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -1

Query: 125 TFEWFEKISIR 93
           T++WFEK+ ++
Sbjct: 261 TYDWFEKLELK 271


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +2

Query: 149 RTWQRRGLWALALLKCRYLCSQQTDEDEQINSKEDN 256
           R W RRG     +    Y+C      DE ++ + ++
Sbjct: 210 RFWLRRGFDGFRVDALPYICEDMRFLDEPLSGETND 245


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +2

Query: 149 RTWQRRGLWALALLKCRYLCSQQTDEDEQINSKEDN 256
           R W RRG     +    Y+C      DE ++ + ++
Sbjct: 210 RFWLRRGFDGFRVDALPYICEDMRFLDEPLSGETND 245


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 221 DEDEQINSKEDNRG 262
           D+DE+   +ED RG
Sbjct: 281 DDDEENEEEEDGRG 294


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,666
Number of Sequences: 438
Number of extensions: 2378
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)