Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1840
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   3.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.5  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 585 PSDQQHHMHSPHHKLD 632
           P  Q +H HS HHK++
Sbjct: 178 PGTQFYHSHSGHHKVN 193


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 7/30 (23%)
 Frame = +3

Query: 561 LHIKMLELPSD-------QQHHMHSPHHKL 629
           LHIK   L SD         HH H  HH+L
Sbjct: 74  LHIKQEPLGSDGPMPAQPPHHHQHPHHHQL 103


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 7/30 (23%)
 Frame = +3

Query: 561 LHIKMLELPSD-------QQHHMHSPHHKL 629
           LHIK   L SD         HH H  HH+L
Sbjct: 74  LHIKQEPLGSDGPMPAQPPHHHQHPHHHQL 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,250
Number of Sequences: 2352
Number of extensions: 11240
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)