Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1839
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065859-1|BAC06077.1|  314|Homo sapiens seven transmembrane hel...    33   0.89 
AL133410-21|CAI10998.1|  312|Homo sapiens olfactory receptor, fa...    31   4.7  
AB065705-1|BAC05928.1|  312|Homo sapiens seven transmembrane hel...    31   4.7  

>AB065859-1|BAC06077.1|  314|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 314

 Score = 33.1 bits (72), Expect = 0.89
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 508 LHKRIYFFLKEIELFIVCYT*KMLELAIRPATSYAFTTPQARCGM*MF 651
           LH  +YFFL  + L  +CY+  ++   +     +  T  QARC    F
Sbjct: 55  LHTPMYFFLSHLSLVDICYSSAIIPQMLAVLWEHGTTISQARCAAQFF 102


>AL133410-21|CAI10998.1|  312|Homo sapiens olfactory receptor,
           family 13, subfamily J, member 1 protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 493 VLKLSLHKRIYFFLKEIELFIVCYT*KMLELAIRPATSYAFTTPQARCGM*M 648
           VL + LH  +YFFL  +    +CYT   + L +    S   T   A C + M
Sbjct: 50  VLDIHLHTPVYFFLGNLSTLDICYTPTFVPLMLVHLLSSRKTISFAVCAIQM 101


>AB065705-1|BAC05928.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 493 VLKLSLHKRIYFFLKEIELFIVCYT*KMLELAIRPATSYAFTTPQARCGM*M 648
           VL + LH  +YFFL  +    +CYT   + L +    S   T   A C + M
Sbjct: 50  VLDIHLHTPVYFFLGNLSTLDICYTPTFVPLMLVHLLSSRKTISFAVCAIQM 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,212,103
Number of Sequences: 237096
Number of extensions: 1453403
Number of successful extensions: 6770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)