BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1838
(621 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069045-1|AAL39190.1| 183|Drosophila melanogaster GH04664p pro... 88 8e-18
AE014296-312|AAN11494.1| 221|Drosophila melanogaster CG17248-PD... 88 8e-18
AE014296-311|AAS64932.1| 192|Drosophila melanogaster CG17248-PE... 88 8e-18
AE014296-310|AAF47530.1| 192|Drosophila melanogaster CG17248-PB... 88 8e-18
AE014296-309|AAN11493.1| 183|Drosophila melanogaster CG17248-PC... 88 8e-18
AE014296-308|AAF47529.1| 183|Drosophila melanogaster CG17248-PA... 88 8e-18
X76200-1|CAA53793.1| 152|Drosophila melanogaster synaptobrevin ... 69 7e-12
BT009942-1|AAQ22411.1| 129|Drosophila melanogaster SD05285p pro... 69 7e-12
BT003769-1|AAO41448.1| 132|Drosophila melanogaster RE28766p pro... 69 7e-12
AE013599-1053|AAM68777.1| 132|Drosophila melanogaster CG12210-P... 69 7e-12
AE013599-1052|AAF58820.1| 129|Drosophila melanogaster CG12210-P... 69 7e-12
L14270-2|AAA28923.1| 132|Drosophila melanogaster synaptobrevin ... 65 6e-11
L14270-1|AAA28924.1| 152|Drosophila melanogaster synaptobrevin ... 65 6e-11
AY071695-1|AAL49317.1| 218|Drosophila melanogaster RH15778p pro... 32 0.54
AE013599-938|AAF58892.1| 218|Drosophila melanogaster CG1599-PA ... 32 0.54
AY069680-1|AAL39825.1| 211|Drosophila melanogaster LD45288p pro... 32 0.72
AL031583-8|CAA20899.2| 211|Drosophila melanogaster EG:34F3.8 pr... 32 0.72
AE014298-112|AAF45554.1| 211|Drosophila melanogaster CG7359-PA ... 32 0.72
AY071500-1|AAL49122.1| 514|Drosophila melanogaster RE55842p pro... 30 2.2
AE014297-1038|AAF54448.2| 514|Drosophila melanogaster CG12946-P... 30 2.2
AE014297-1037|ABI31156.1| 630|Drosophila melanogaster CG12946-P... 30 2.2
>AY069045-1|AAL39190.1| 183|Drosophila melanogaster GH04664p
protein.
Length = 183
Score = 88.2 bits (209), Expect = 8e-18
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVVDIM++NV+KVL+RD+KLSELD RADALQ+GASQF +QA LK KFWLQNLK
Sbjct: 51 EVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLK 104
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 116 AAEGGNPGGLAPAEPQTGPDGEIIGGPRTP 205
AA G+ A A G DGEI+GGP P
Sbjct: 4 AAPAGDAPPNAGAPAGEGGDGEIVGGPHNP 33
>AE014296-312|AAN11494.1| 221|Drosophila melanogaster CG17248-PD,
isoform D protein.
Length = 221
Score = 88.2 bits (209), Expect = 8e-18
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVVDIM++NV+KVL+RD+KLSELD RADALQ+GASQF +QA LK KFWLQNLK
Sbjct: 60 EVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLK 113
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 116 AAEGGNPGGLAPAEPQTGPDGEIIGGPRTP 205
AA G+ A A G DGEI+GGP P
Sbjct: 13 AAPAGDAPPNAGAPAGEGGDGEIVGGPHNP 42
>AE014296-311|AAS64932.1| 192|Drosophila melanogaster CG17248-PE,
isoform E protein.
Length = 192
Score = 88.2 bits (209), Expect = 8e-18
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVVDIM++NV+KVL+RD+KLSELD RADALQ+GASQF +QA LK KFWLQNLK
Sbjct: 60 EVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLK 113
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 116 AAEGGNPGGLAPAEPQTGPDGEIIGGPRTP 205
AA G+ A A G DGEI+GGP P
Sbjct: 13 AAPAGDAPPNAGAPAGEGGDGEIVGGPHNP 42
>AE014296-310|AAF47530.1| 192|Drosophila melanogaster CG17248-PB,
isoform B protein.
Length = 192
Score = 88.2 bits (209), Expect = 8e-18
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVVDIM++NV+KVL+RD+KLSELD RADALQ+GASQF +QA LK KFWLQNLK
Sbjct: 60 EVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLK 113
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 116 AAEGGNPGGLAPAEPQTGPDGEIIGGPRTP 205
AA G+ A A G DGEI+GGP P
Sbjct: 13 AAPAGDAPPNAGAPAGEGGDGEIVGGPHNP 42
>AE014296-309|AAN11493.1| 183|Drosophila melanogaster CG17248-PC,
isoform C protein.
Length = 183
Score = 88.2 bits (209), Expect = 8e-18
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVVDIM++NV+KVL+RD+KLSELD RADALQ+GASQF +QA LK KFWLQNLK
Sbjct: 51 EVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLK 104
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 116 AAEGGNPGGLAPAEPQTGPDGEIIGGPRTP 205
AA G+ A A G DGEI+GGP P
Sbjct: 4 AAPAGDAPPNAGAPAGEGGDGEIVGGPHNP 33
>AE014296-308|AAF47529.1| 183|Drosophila melanogaster CG17248-PA,
isoform A protein.
Length = 183
Score = 88.2 bits (209), Expect = 8e-18
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVVDIM++NV+KVL+RD+KLSELD RADALQ+GASQF +QA LK KFWLQNLK
Sbjct: 51 EVVDIMRTNVEKVLERDSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLK 104
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 116 AAEGGNPGGLAPAEPQTGPDGEIIGGPRTP 205
AA G+ A A G DGEI+GGP P
Sbjct: 4 AAPAGDAPPNAGAPAGEGGDGEIVGGPHNP 33
>X76200-1|CAA53793.1| 152|Drosophila melanogaster synaptobrevin
protein.
Length = 152
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQF +QA LK K W N+K
Sbjct: 57 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMK 110
>BT009942-1|AAQ22411.1| 129|Drosophila melanogaster SD05285p
protein.
Length = 129
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQF +QA LK K W N+K
Sbjct: 34 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMK 87
>BT003769-1|AAO41448.1| 132|Drosophila melanogaster RE28766p
protein.
Length = 132
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQF +QA LK K W N+K
Sbjct: 57 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMK 110
>AE013599-1053|AAM68777.1| 132|Drosophila melanogaster CG12210-PB,
isoform B protein.
Length = 132
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQF +QA LK K W N+K
Sbjct: 57 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMK 110
>AE013599-1052|AAF58820.1| 129|Drosophila melanogaster CG12210-PA,
isoform A protein.
Length = 129
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQF +QA LK K W N+K
Sbjct: 34 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMK 87
>L14270-2|AAA28923.1| 132|Drosophila melanogaster synaptobrevin
protein.
Length = 132
Score = 65.3 bits (152), Expect = 6e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQ +QA LK K W N+K
Sbjct: 57 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQSEQQAGKLKRKQWWANMK 110
>L14270-1|AAA28924.1| 152|Drosophila melanogaster synaptobrevin
protein.
Length = 152
Score = 65.3 bits (152), Expect = 6e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
EVV IM+ NV+KVL+RD KLSEL RAD L++GASQ +QA LK K W N+K
Sbjct: 57 EVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQSEQQAGKLKRKQWWANMK 110
>AY071695-1|AAL49317.1| 218|Drosophila melanogaster RH15778p
protein.
Length = 218
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
E+ DIM N+D + DR KL L + + L + F + +++L + + +N++
Sbjct: 135 ELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIR 188
>AE013599-938|AAF58892.1| 218|Drosophila melanogaster CG1599-PA
protein.
Length = 218
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNKFWLQNLK 417
E+ DIM N+D + DR KL L + + L + F + +++L + + +N++
Sbjct: 135 ELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIR 188
>AY069680-1|AAL39825.1| 211|Drosophila melanogaster LD45288p
protein.
Length = 211
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNK 396
+V IM N+D VL R L+ELD + L + ++ + AK L K
Sbjct: 142 DVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRK 188
>AL031583-8|CAA20899.2| 211|Drosophila melanogaster EG:34F3.8
protein.
Length = 211
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNK 396
+V IM N+D VL R L+ELD + L + ++ + AK L K
Sbjct: 142 DVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRK 188
>AE014298-112|AAF45554.1| 211|Drosophila melanogaster CG7359-PA
protein.
Length = 211
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 256 EVVDIMKSNVDKVLDRDAKLSELDYRADALQEGASQF*RQAKSLKNK 396
+V IM N+D VL R L+ELD + L + ++ + AK L K
Sbjct: 142 DVQRIMVQNIDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRK 188
>AY071500-1|AAL49122.1| 514|Drosophila melanogaster RE55842p
protein.
Length = 514
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 195 GPPIISPSGPVWGSAGARPPGLPPSAAI 112
G P P PV+G+ GA PP PPS+ +
Sbjct: 392 GVPPAPPPMPVFGAGGAPPPPPPPSSGM 419
>AE014297-1038|AAF54448.2| 514|Drosophila melanogaster CG12946-PA,
isoform A protein.
Length = 514
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 195 GPPIISPSGPVWGSAGARPPGLPPSAAI 112
G P P PV+G+ GA PP PPS+ +
Sbjct: 392 GVPPAPPPMPVFGAGGAPPPPPPPSSGM 419
>AE014297-1037|ABI31156.1| 630|Drosophila melanogaster CG12946-PB,
isoform B protein.
Length = 630
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 195 GPPIISPSGPVWGSAGARPPGLPPSAAI 112
G P P PV+G+ GA PP PPS+ +
Sbjct: 508 GVPPAPPPMPVFGAGGAPPPPPPPSSGM 535
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,627,578
Number of Sequences: 53049
Number of extensions: 566152
Number of successful extensions: 1764
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -