Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1827
         (808 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.7  
AY825674-1|AAV70237.1|  168|Anopheles gambiae olfactory receptor...    23   8.4  
AY825673-1|AAV70236.1|  168|Anopheles gambiae olfactory receptor...    23   8.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 575 PGFVPRPPGAEGDSSP 622
           PG  PRPP A+G   P
Sbjct: 242 PGMQPRPPSAQGMQRP 257



 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 707 PGLIPRSQSAQGR---PELRRPASVRNGTPL 790
           PG+ PR  SAQG    P + +P  +R   P+
Sbjct: 242 PGMQPRPPSAQGMQRPPMMGQPPPIRPPNPM 272


>AY825674-1|AAV70237.1|  168|Anopheles gambiae olfactory receptor
           GPRor70 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 140 YLEYLNRKYNML*RENDSFVIECHEIKH*IFS--LKKKNKNELIEQWVAILV 289
           +L ++   Y M+  + D F+I   E++  +      KKN++ L E+WV + V
Sbjct: 119 FLYFMYAMYTMV--KADIFIIHLGELEKMLNDPLTMKKNQSSLREKWVQLHV 168


>AY825673-1|AAV70236.1|  168|Anopheles gambiae olfactory receptor
           GPRor70 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 140 YLEYLNRKYNML*RENDSFVIECHEIKH*IFS--LKKKNKNELIEQWVAILV 289
           +L ++   Y M+  + D F+I   E++  +      KKN++ L E+WV + V
Sbjct: 119 FLYFMYAMYTMV--KADIFIIHLGELEKMLNDPLTMKKNQSSLREKWVQLHV 168


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 713 LIPRSQSAQGRPELRRPASVRNGTPLRCMHS 805
           ++P+ Q  Q   +  R  +VRNG  L  +H+
Sbjct: 199 IVPQQQQQQHLMDAVRQRAVRNGASLSPVHT 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,654
Number of Sequences: 2352
Number of extensions: 13555
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)