Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1827
(808 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 23 2.5
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 5.8
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 5.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 7.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 7.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 7.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 7.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 7.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 7.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 7.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 7.7
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 694 PRRRSRPHSAVTKCARTSRTKATR 765
P R+RP +KCA T+ T R
Sbjct: 153 PMNRNRPAYLASKCALTTLTDCLR 176
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +2
Query: 122 QSSDPFYLEYLNRKYNML*RENDSFVIECHEIKH 223
+S +P + L+ YN N+++ C+ I H
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINH 108
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 175 ITRKRLICNRVSRNKTLNI*FK 240
+TR+ ICN S +K N FK
Sbjct: 356 VTRESQICNNSSSDKERNSSFK 377
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDNKIDLRSRTKEERLQYRREA 42
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 683 FEQSRDEDPGLIPRSQSAQGRPELRRPA 766
F+Q R+ED + RS++ + R + RR A
Sbjct: 15 FKQLRNEDSEIDLRSRTKEERLQHRREA 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,178
Number of Sequences: 438
Number of extensions: 3450
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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