Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1826
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF125964-7|AAD14750.1| 350|Caenorhabditis elegans Hypothetical ... 30 1.2
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 30 1.6
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 2.9
U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical p... 29 2.9
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 29 3.8
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 29 3.8
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical pr... 28 5.0
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 5.0
Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical p... 28 6.6
Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical p... 28 6.6
Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical p... 28 6.6
Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical p... 28 6.6
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 28 6.6
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 28 6.6
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 27 8.7
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 27 8.7
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQ 282
K KE ++KP N E + + P+K ++ E+K + KK EK+
Sbjct: 68 KKKEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKK 112
>AF125964-7|AAD14750.1| 350|Caenorhabditis elegans Hypothetical
protein W03G1.2 protein.
Length = 350
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPR--KNQQLASSERKTKNKKRLEKQSS 276
K + S+ RK +EKK + R K QQL S++ KNKK K +S
Sbjct: 3 KLSKKSSRRKVKNINEKKKKSKARSHKKQQLQKSKQHGKNKKTKTKSTS 51
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 410 KEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEK 285
K+ A++K + +KKT+G KN+ A E+ + + +EK
Sbjct: 552 KKEKAEKK-EKEEKKKTEGEEEKNEDAAGEEKTEEKTEEVEK 592
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 410 KEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEK 285
K+ A++K + +KKT+G KN+ A E+ + + +EK
Sbjct: 568 KKEKAEKK-EKEEKKKTEGEEEKNEDAAGEEKTEEKTEEVEK 608
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKK 297
K +E D+K + EKK + K ++ S++ +K+KK
Sbjct: 126 KDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKK 165
>U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical
protein F20D6.10 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 419 AKTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKK 297
+ TKEH H K + MP++ +L SSE +++K
Sbjct: 370 SSTKEHHHKEHIHHAESKDSPNMPKRYAKLKSSESSRESQK 410
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = -1
Query: 365 KTQGMPRKNQQLASSERKTKNK-KRLEKQSSAIADSIGN---HLMIRKLSMMNIFLIFYL 198
K G +K + SSE KTKNK K+ + ++SA +G+ L + S ++ + L
Sbjct: 81 KATGDGKKKKNGKSSETKTKNKVKKNKSKASADESQMGSAEERLSTNRPSTLDYCQVAIL 140
Query: 197 RELISVVRLI*IIYLIFS 144
L+ ++ L+ I L+ S
Sbjct: 141 ITLLVIICLVSIPVLLIS 158
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 413 TKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQ 282
TKE D K R S +K G+P N Q +++R + KR E Q
Sbjct: 188 TKEQQEDAKRTRLSSRKPSGIPCGNSQ-RNTKRIRSSTKRAEGQ 230
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQ 282
K +E D+K + EKK + + + SS+ K K + EK+
Sbjct: 126 KDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKK 170
>Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical
protein F15D3.8 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIADSIGNH 249
K EH ++ + E +G ++ + +++ RK KN+ +E+ AI + + NH
Sbjct: 52 KQVEHET-KQVEKKRENLEKGHKKEMRNMSADFRKKKNEIEMEQLKLAIGNRVENH 106
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIAD 264
K K HS RK HR+ ++ R+ + E+K + KK+ ++SS +D
Sbjct: 425 KRKHHSKSRK-HRSKRSES----REERHRRRKEKKREKKKKRRRRSSTTSD 470
>Z70034-14|CAC44294.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 371 EKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIADSIGNHLM 243
E+ G PR+ +L + ER+ N EK +++ I NHL+
Sbjct: 228 EQYESGYPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLI 270
>Z70034-13|CAC44293.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 371 EKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIADSIGNHLM 243
E+ G PR+ +L + ER+ N EK +++ I NHL+
Sbjct: 222 EQYESGYPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLI 264
>Z49910-11|CAC44292.1| 356|Caenorhabditis elegans Hypothetical
protein C18E9.11b protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 371 EKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIADSIGNHLM 243
E+ G PR+ +L + ER+ N EK +++ I NHL+
Sbjct: 228 EQYESGYPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLI 270
>Z49910-10|CAC44291.1| 350|Caenorhabditis elegans Hypothetical
protein C18E9.11a protein.
Length = 350
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 371 EKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIADSIGNHLM 243
E+ G PR+ +L + ER+ N EK +++ I NHL+
Sbjct: 222 EQYESGYPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLI 264
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -1
Query: 410 KEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSA 273
++ AD+K S +K + +KN++ +++ K KK S++
Sbjct: 11 RKKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTS 56
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -1
Query: 410 KEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSA 273
++ AD+K S +K + +KN++ +++ K KK S++
Sbjct: 11 RKKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTS 56
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIA 267
K K+ D+ R ++ + R+ +++A E+K K+RLE + + A
Sbjct: 302 KVKQELDDKDRRREDRERKRREKRELERMAEEEKKRLEKERLEAEQRSRA 351
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIA 267
K K+ D+ R ++ + R+ +++A E+K K+RLE + + A
Sbjct: 302 KVKQELDDKDRRREDRERKRREKRELERMAEEEKKRLEKERLEAEQRSRA 351
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -1
Query: 416 KTKEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSAIAD 264
KT+E ++RK + E+K +N++ + E K K++ + +K+ + D
Sbjct: 114 KTQETKSERK-DKKDERKEDDKKEENKEKSKDEEKKKDEVKDKKEDEKMDD 163
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
protein ZK430.5 protein.
Length = 1276
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 156 LNFQFTPRTNSNAFSAPPRRSRGYNTYGQGSGHH 55
++F TP NSN FS + + +G G+H
Sbjct: 1 MHFLSTPDKNSNCFSKKVNSANNTQNFAKGMGNH 34
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -1
Query: 410 KEHSADRKPHRNSEKKTQGMPRKNQQLASSERKTKNKKRLEKQSSA 273
+ S R P R+ E++ + R + +RK + +KR + SS+
Sbjct: 4 RSRSRSRSPKRDREERKRREDRDRDRERKRDRKDRERKRRHRSSSS 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,059,657
Number of Sequences: 27780
Number of extensions: 251126
Number of successful extensions: 862
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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