Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1825
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,...    29   9.9  
AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,...    29   9.9  
AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,...    29   9.9  

>AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,
           isoform B protein.
          Length = 1674

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 442 KILGIFFYIITLNSVLTG*KLATKRYIFLCSSL 344
           KIL IF Y+IT   VLTG  +A    +F+ S +
Sbjct: 84  KILKIFAYVITFIIVLTGGVIAKGTMLFMTSQV 116


>AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,
           isoform C protein.
          Length = 1615

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 442 KILGIFFYIITLNSVLTG*KLATKRYIFLCSSL 344
           KIL IF Y+IT   VLTG  +A    +F+ S +
Sbjct: 84  KILKIFAYVITFIIVLTGGVIAKGTMLFMTSQV 116


>AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,
           isoform A protein.
          Length = 1615

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 442 KILGIFFYIITLNSVLTG*KLATKRYIFLCSSL 344
           KIL IF Y+IT   VLTG  +A    +F+ S +
Sbjct: 84  KILKIFAYVITFIIVLTGGVIAKGTMLFMTSQV 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,006,873
Number of Sequences: 53049
Number of extensions: 500550
Number of successful extensions: 841
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)