BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1821
(748 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 28 0.35
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 28 0.35
AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 25 1.9
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 7.6
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 7.6
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 27.9 bits (59), Expect = 0.35
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 517 YKTIEYQYADLVTTIHCQYLNMQFRKGHMSHISSN 413
Y T Y A+L I Y++ QFR+GH H+S++
Sbjct: 1136 YHTAAYDNAELDIFIENTYIHEQFREGH--HMSND 1168
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 27.9 bits (59), Expect = 0.35
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 517 YKTIEYQYADLVTTIHCQYLNMQFRKGHMSHISSN 413
Y T Y A+L I Y++ QFR+GH H+S++
Sbjct: 1136 YHTAAYDNAELDIFIENTYIHEQFREGH--HMSND 1168
>AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein.
Length = 471
Score = 25.4 bits (53), Expect = 1.9
Identities = 9/38 (23%), Positives = 23/38 (60%)
Frame = +3
Query: 453 IFKYWQWMVVTKSAYWYSIVLYPIIHNNLYFTESVTSL 566
++ +W ++V+ +W+S+ L+ I N++ E ++ L
Sbjct: 375 VYSHWVFLVII--LHWFSMFLWLISPKNVFHGERISRL 410
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.4 bits (48), Expect = 7.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 87 MVVNSLFR*SQDKKFLLQKVK*KHSIGTW 1
+ V+ L ++KK L+K + K IG+W
Sbjct: 1413 VAVDVLVEKGEEKKISLRKAEVKQRIGSW 1441
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 23.4 bits (48), Expect = 7.6
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 436 HMSHISSNTFFIYM 395
H+S ++ NTFF YM
Sbjct: 297 HVSPLTPNTFFFYM 310
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,493
Number of Sequences: 2352
Number of extensions: 14925
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -