Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1821
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094856-1|AAM11209.1|  367|Drosophila melanogaster RE18536p pro...    30   3.9  
AF271718-1|AAL36976.1|  367|Drosophila melanogaster innexin 4 pr...    30   3.9  
AE014296-1130|AAF50655.1|  367|Drosophila melanogaster CG10125-P...    30   3.9  
BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p pro...    29   6.7  
AY113369-1|AAM29374.1|  910|Drosophila melanogaster LD32717p pro...    29   6.7  
AY102681-1|AAM27510.1| 1034|Drosophila melanogaster LD22374p pro...    29   6.7  
AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB...    29   6.7  
AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA...    29   6.7  
AE013599-48|ABI31021.1| 1034|Drosophila melanogaster CG3107-PC, ...    29   6.7  
AE013599-47|AAM68370.1| 1034|Drosophila melanogaster CG3107-PB, ...    29   6.7  
AE013599-46|AAF57348.2| 1034|Drosophila melanogaster CG3107-PA, ...    29   6.7  

>AY094856-1|AAM11209.1|  367|Drosophila melanogaster RE18536p
           protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 443 KRAHVAYFVKYIFHIHVVLRLTYTNFIIIPVIF 345
           K  H  YFV Y+F   + L ++  NF+++ V F
Sbjct: 172 KETHFRYFVSYVFCEILNLSISILNFLLLDVFF 204


>AF271718-1|AAL36976.1|  367|Drosophila melanogaster innexin 4
           protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 443 KRAHVAYFVKYIFHIHVVLRLTYTNFIIIPVIF 345
           K  H  YFV Y+F   + L ++  NF+++ V F
Sbjct: 172 KETHFRYFVSYVFCEILNLSISILNFLLLDVFF 204


>AE014296-1130|AAF50655.1|  367|Drosophila melanogaster CG10125-PA
           protein.
          Length = 367

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 443 KRAHVAYFVKYIFHIHVVLRLTYTNFIIIPVIF 345
           K  H  YFV Y+F   + L ++  NF+++ V F
Sbjct: 172 KETHFRYFVSYVFCEILNLSISILNFLLLDVFF 204


>BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p protein.
          Length = 1354

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = -2

Query: 507  LSTSTQTWSLPSTANI*ICNFEKGTCRIFRQIHFSYTCSFEAYLHQF 367
            + TS QT  + S ++  I  +EK +  +F+Q+H +++   + ++ QF
Sbjct: 1076 VQTSLQTAFIESMSSTLIPAYEKSSQNMFKQLHDAFSVGIKDFMVQF 1122


>AY113369-1|AAM29374.1|  910|Drosophila melanogaster LD32717p
           protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = -2

Query: 507 LSTSTQTWSLPSTANI*ICNFEKGTCRIFRQIHFSYTCSFEAYLHQF 367
           + TS QT  + S ++  I  +EK +  +F+Q+H +++   + ++ QF
Sbjct: 632 VQTSLQTAFIESMSSTLIPAYEKSSQNMFKQLHDAFSVGIKDFMVQF 678


>AY102681-1|AAM27510.1| 1034|Drosophila melanogaster LD22374p
           protein.
          Length = 1034

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +3

Query: 273 IYFLKQCKI*NINF*DIF*C*LAIENYWNYYKIGVGKPQNYMYMKNVFDEICDMCPFRNC 452
           ++ L Q  I N+ F D     + IENY +Y  +GV    +   M     ++CD    ++ 
Sbjct: 704 MFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSL 763

Query: 453 IF 458
           ++
Sbjct: 764 LY 765


>AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB,
            isoform B protein.
          Length = 1354

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = -2

Query: 507  LSTSTQTWSLPSTANI*ICNFEKGTCRIFRQIHFSYTCSFEAYLHQF 367
            + TS QT  + S ++  I  +EK +  +F+Q+H +++   + ++ QF
Sbjct: 1076 VQTSLQTAFIESMSSTLIPAYEKSSQNMFKQLHDAFSVGIKDFMVQF 1122


>AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA,
            isoform A protein.
          Length = 1354

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = -2

Query: 507  LSTSTQTWSLPSTANI*ICNFEKGTCRIFRQIHFSYTCSFEAYLHQF 367
            + TS QT  + S ++  I  +EK +  +F+Q+H +++   + ++ QF
Sbjct: 1076 VQTSLQTAFIESMSSTLIPAYEKSSQNMFKQLHDAFSVGIKDFMVQF 1122


>AE013599-48|ABI31021.1| 1034|Drosophila melanogaster CG3107-PC,
           isoform C protein.
          Length = 1034

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +3

Query: 273 IYFLKQCKI*NINF*DIF*C*LAIENYWNYYKIGVGKPQNYMYMKNVFDEICDMCPFRNC 452
           ++ L Q  I N+ F D     + IENY +Y  +GV    +   M     ++CD    ++ 
Sbjct: 704 MFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSL 763

Query: 453 IF 458
           ++
Sbjct: 764 LY 765


>AE013599-47|AAM68370.1| 1034|Drosophila melanogaster CG3107-PB,
           isoform B protein.
          Length = 1034

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +3

Query: 273 IYFLKQCKI*NINF*DIF*C*LAIENYWNYYKIGVGKPQNYMYMKNVFDEICDMCPFRNC 452
           ++ L Q  I N+ F D     + IENY +Y  +GV    +   M     ++CD    ++ 
Sbjct: 704 MFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSL 763

Query: 453 IF 458
           ++
Sbjct: 764 LY 765


>AE013599-46|AAF57348.2| 1034|Drosophila melanogaster CG3107-PA,
           isoform A protein.
          Length = 1034

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +3

Query: 273 IYFLKQCKI*NINF*DIF*C*LAIENYWNYYKIGVGKPQNYMYMKNVFDEICDMCPFRNC 452
           ++ L Q  I N+ F D     + IENY +Y  +GV    +   M     ++CD    ++ 
Sbjct: 704 MFALCQELIKNVRFDDSERLKMLIENYISYISVGVASSGHLYAMLGATSQVCDAGKLKSL 763

Query: 453 IF 458
           ++
Sbjct: 764 LY 765


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,908,721
Number of Sequences: 53049
Number of extensions: 594589
Number of successful extensions: 947
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)