BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1819X
(318 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94747-1|AAC18913.1| 342|Homo sapiens HAN11 protein. 72 4e-13
BC001264-1|AAH01264.1| 342|Homo sapiens WDR68 protein protein. 72 4e-13
X73029-1|CAA51512.1| 1153|Homo sapiens nitric oxide synthase pro... 29 2.3
U31511-1|AAB49041.1| 1153|Homo sapiens nitric oxide synthase pro... 29 2.3
U20141-1|AAB60366.1| 1153|Homo sapiens nitric oxide synthase pro... 29 2.3
U05810-1|AAA56666.1| 1153|Homo sapiens inducible nitric oxide sy... 29 2.3
L24553-1|AAA36375.1| 1153|Homo sapiens nitric oxide synthase pro... 29 2.3
L09210-1|AAA59171.1| 1153|Homo sapiens inducible nitric oxide sy... 29 2.3
D26525-1|BAA05531.1| 1153|Homo sapiens inducible type of nitric ... 29 2.3
DQ060518-1|AAY43131.1| 1153|Homo sapiens nitric oxide synthase 2... 29 2.3
BC130283-1|AAI30284.1| 1153|Homo sapiens nitric oxide synthase 2... 29 2.3
AF068236-1|AAC19133.1| 1153|Homo sapiens inducible nitric oxide ... 29 2.3
AB022318-1|BAA37123.1| 1114|Homo sapiens inducible nitric oxide ... 29 2.3
>U94747-1|AAC18913.1| 342|Homo sapiens HAN11 protein.
Length = 342
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 194 RKEIYKYQAPWPLYSLNWSVNLHKSFRLALGSFVDVYNNKV 316
RKEIYKY+APW +Y++NWSV K FRLALGSFV+ YNNKV
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKV 47
>BC001264-1|AAH01264.1| 342|Homo sapiens WDR68 protein protein.
Length = 342
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 194 RKEIYKYQAPWPLYSLNWSVNLHKSFRLALGSFVDVYNNKV 316
RKEIYKY+APW +Y++NWSV K FRLALGSFV+ YNNKV
Sbjct: 7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKV 47
>X73029-1|CAA51512.1| 1153|Homo sapiens nitric oxide synthase
protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>U31511-1|AAB49041.1| 1153|Homo sapiens nitric oxide synthase
protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>U20141-1|AAB60366.1| 1153|Homo sapiens nitric oxide synthase
protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>U05810-1|AAA56666.1| 1153|Homo sapiens inducible nitric oxide
synthase protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>L24553-1|AAA36375.1| 1153|Homo sapiens nitric oxide synthase
protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>L09210-1|AAA59171.1| 1153|Homo sapiens inducible nitric oxide
synthase protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>D26525-1|BAA05531.1| 1153|Homo sapiens inducible type of nitric
oxide synthase protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>DQ060518-1|AAY43131.1| 1153|Homo sapiens nitric oxide synthase 2A
(inducible, hepatocytes) protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>BC130283-1|AAI30284.1| 1153|Homo sapiens nitric oxide synthase 2A
(inducible, hepatocytes) protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>AF068236-1|AAC19133.1| 1153|Homo sapiens inducible nitric oxide
synthase protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 733 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 771
>AB022318-1|BAA37123.1| 1114|Homo sapiens inducible nitric oxide
synthase protein.
Length = 1114
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 175 YQFRHDTQRNIQIP-SAMAIILIELVCQPAQEFQVSPGQ 288
+ R +++N+Q P S+ A IL+EL C+ Q PG+
Sbjct: 694 FTMRLKSRQNLQSPTSSRATILVELSCEDGQGLNYLPGE 732
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,175,152
Number of Sequences: 237096
Number of extensions: 863593
Number of successful extensions: 1290
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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