Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1819X
         (318 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3173|AAF50953.2|  343|Drosophila melanogaster CG14614-P...    75   2e-14
BT022578-1|AAY54994.1|  180|Drosophila melanogaster IP06711p pro...    27   3.9  
BT022541-1|AAY54957.1|  180|Drosophila melanogaster IP06511p pro...    27   3.9  
BT022514-1|AAY54930.1|  180|Drosophila melanogaster IP06411p pro...    27   3.9  
AE014296-3075|AAF49218.1|  181|Drosophila melanogaster CG11637-P...    27   3.9  
AY118668-1|AAM50528.1|  601|Drosophila melanogaster AT01616p pro...    27   5.2  
BT003585-1|AAO39589.1|  687|Drosophila melanogaster LD11102p pro...    26   9.1  
AE014297-2294|AAF55379.3|  682|Drosophila melanogaster CG18213-P...    26   9.1  

>AE014298-3173|AAF50953.2|  343|Drosophila melanogaster CG14614-PA
           protein.
          Length = 343

 Score = 75.4 bits (177), Expect = 2e-14
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = +2

Query: 194 RKEIYKYQAPWPLYSLNWSVNLHKSFRLALGSFVDVYNNKV 316
           RKEIYKY APWPLYS+NWSV   K FRLALGSF++ YNNKV
Sbjct: 8   RKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFIEEYNNKV 48


>BT022578-1|AAY54994.1|  180|Drosophila melanogaster IP06711p
           protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 234 YNGHGAWYLYISLRIVPELVLELLCGI 154
           YN   + Y+Y  + ++  LVL+LL GI
Sbjct: 105 YNDKASTYIYSMIMVILSLVLQLLVGI 131


>BT022541-1|AAY54957.1|  180|Drosophila melanogaster IP06511p
           protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 234 YNGHGAWYLYISLRIVPELVLELLCGI 154
           YN   + Y+Y  + ++  LVL+LL GI
Sbjct: 105 YNDKASTYIYSMIMVILSLVLQLLVGI 131


>BT022514-1|AAY54930.1|  180|Drosophila melanogaster IP06411p
           protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 234 YNGHGAWYLYISLRIVPELVLELLCGI 154
           YN   + Y+Y  + ++  LVL+LL GI
Sbjct: 105 YNDKASTYIYSMIMVILSLVLQLLVGI 131


>AE014296-3075|AAF49218.1|  181|Drosophila melanogaster CG11637-PA
           protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 234 YNGHGAWYLYISLRIVPELVLELLCGI 154
           YN   + Y+Y  + ++  LVL+LL GI
Sbjct: 106 YNDKASTYIYSMIMVILSLVLQLLVGI 132


>AY118668-1|AAM50528.1|  601|Drosophila melanogaster AT01616p
           protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
 Frame = -2

Query: 308 CCTRQQNCPGLT*NSCAG*QTNSMSIMAMALGICIF----LCVSCLNWYSNCCVAST 150
           CCT    CP  T   C     N     A     C+F        C N  ++CC  S+
Sbjct: 313 CCTCSNCCPSRTSQVCPMQMGNQYQCPANGSNCCMFKPESFANGCYNGGTSCCPLSS 369


>BT003585-1|AAO39589.1|  687|Drosophila melanogaster LD11102p
           protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 163 QQFEYQFRHDTQRNIQIPSAMAIIL 237
           QQF YQ+ H  +  +Q+ S + + L
Sbjct: 584 QQFVYQYFHKIENTVQLKSTLCVTL 608


>AE014297-2294|AAF55379.3|  682|Drosophila melanogaster CG18213-PA
           protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 163 QQFEYQFRHDTQRNIQIPSAMAIIL 237
           QQF YQ+ H  +  +Q+ S + + L
Sbjct: 584 QQFVYQYFHKIENTVQLKSTLCVTL 608


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,288,739
Number of Sequences: 53049
Number of extensions: 273678
Number of successful extensions: 577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)