Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1819X
(318 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 0.89
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 0.89
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 4.7
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 4.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 6.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 6.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 6.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 6.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 20 8.3
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.0 bits (47), Expect = 0.89
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -1
Query: 315 TLLLYTSTKLPRANLKLLCRLTDQFNEYNGHG 220
+L + +K R N++ + ++ Q N+Y G+G
Sbjct: 484 SLPMVNHSKSSRINIERMKQVYQQLNKYRGNG 515
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.0 bits (47), Expect = 0.89
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 33 TEAHGQFNI*IGIFKSNITKP 95
TEA+ +FN+ I +KS T P
Sbjct: 291 TEAYTEFNLTIKYYKSGSTVP 311
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 20.6 bits (41), Expect = 4.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 212 ICIFLCVSCLNW 177
IC LC+S L+W
Sbjct: 292 ICHILCMSDLHW 303
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.6 bits (41), Expect = 4.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 207 YISLRIVPELVLELLCGIDISDNV 136
+ RI PEL E L +I DN+
Sbjct: 246 FFRYRITPELYSEHLVVPEIEDNL 269
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 128
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 329 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 361
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.3
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 249 DQFNEYNGHGAWYLYISLRIVPELVL--ELLCG 157
+ +N YN H LY ++ + ++ + + CG
Sbjct: 329 NNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCG 361
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 176 YSNCCVASTSVIMFNVSL 123
Y CC S I FN+++
Sbjct: 228 YYPCCTEPYSDITFNITM 245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,329
Number of Sequences: 438
Number of extensions: 2008
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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