Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1818
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    66   4e-13
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    58   1e-10
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                51   1e-08
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    46   4e-07
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    46   4e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    33   0.004
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   7.0  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   9.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.3  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 65.7 bits (153), Expect = 4e-13
 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   ENVLLEGDEDETLVKITDFGLSKFV-GEDSFMKTMCGTPLYLAPEVLRANGQNTYGPEVD 177
           EN+LL        VK+ DFGL+  V GE        GTP YL+PEVL+   +  YG  VD
Sbjct: 38  ENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGYLSPEVLK---KEPYGKPVD 94

Query: 178 VWSLGVIFFVCLVGYLPF 231
           +W+ GVI ++ LVGY PF
Sbjct: 95  IWACGVILYILLVGYPPF 112



 Score = 46.0 bits (104), Expect = 4e-07
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 264 QILNGQYKFSQAHWKNISLQAKLLMKRMLTVQVSRRITXDQILNHAWM 407
           QI  G Y +    W  ++ +AK L+ +MLTV  S+RIT  + L H W+
Sbjct: 123 QIKTGSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 170


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 57.6 bits (133), Expect = 1e-10
 Identities = 32/78 (41%), Positives = 43/78 (55%)
 Frame = +1

Query: 1   ENVLLEGDEDETLVKITDFGLSKFVGEDSFMKTMCGTPLYLAPEVLRANGQNTYGPEVDV 180
           EN+LL+    +  VK+ DFG +K +       T CGTP Y+APEV+   G +      D 
Sbjct: 495 ENLLLDS---QGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDI---SADY 548

Query: 181 WSLGVIFFVCLVGYLPFS 234
           WSLGV+ F  L G  PF+
Sbjct: 549 WSLGVLMFELLTGTPPFT 566


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +1

Query: 43  KITDFGLSKFVGEDSFMKTMCGTPLYLAPEVLRANGQNTYGPEVDVWSLGVIFFVCLVGY 222
           K+TDFG S  +G  + +    GTP Y APEV++   QN   P  D++SLG++ +  L   
Sbjct: 195 KLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIK---QNRPTPAADIYSLGIVAWQMLFRK 251

Query: 223 LPFS 234
           LPF+
Sbjct: 252 LPFA 255


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 46.0 bits (104), Expect = 4e-07
 Identities = 25/87 (28%), Positives = 50/87 (57%)
 Frame = +1

Query: 1   ENVLLEGDEDETLVKITDFGLSKFVGEDSFMKTMCGTPLYLAPEVLRANGQNTYGPEVDV 180
           +NVLL+    E   K+TDFG    + E   + ++ GTP+++APE+L  +    Y   VDV
Sbjct: 726 KNVLLD---IENRAKLTDFGFC--ITEVMMLGSIVGTPVHMAPELLSGH----YDSSVDV 776

Query: 181 WSLGVIFFVCLVGYLPFSHDYKEMSSR 261
           ++ G++F+    G++   + +++  ++
Sbjct: 777 YAFGILFWYLCAGHVRLPYTFEQFHNK 803


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 46.0 bits (104), Expect = 4e-07
 Identities = 25/87 (28%), Positives = 50/87 (57%)
 Frame = +1

Query: 1   ENVLLEGDEDETLVKITDFGLSKFVGEDSFMKTMCGTPLYLAPEVLRANGQNTYGPEVDV 180
           +NVLL+    E   K+TDFG    + E   + ++ GTP+++APE+L  +    Y   VDV
Sbjct: 764 KNVLLD---IENRAKLTDFGFC--ITEVMMLGSIVGTPVHMAPELLSGH----YDSSVDV 814

Query: 181 WSLGVIFFVCLVGYLPFSHDYKEMSSR 261
           ++ G++F+    G++   + +++  ++
Sbjct: 815 YAFGILFWYLCAGHVRLPYTFEQFHNK 841


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 32.7 bits (71), Expect = 0.004
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1   ENVLLEGDEDETLVKITDFGLSKF-VGEDSFMKTMCGTP 114
           +NVLL+ D     +KI DFG+ K  +  D   KT CGTP
Sbjct: 114 DNVLLDQDGH---IKIADFGMCKEGISGDKTTKTFCGTP 149


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 91  MKTMCGTPLYLAPEVLRANGQNTYGPEVD---VWSLGVIFFVCLVG 219
           M T   T   LA +  + +  +TY   V    ++SLG +F +C+ G
Sbjct: 132 MLTTTITLTLLAYQATKIHAVDTYAASVVGYLLYSLGQVFMLCIFG 177


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 10  LLEGDEDETLVKITDFGLSKFV 75
           L   D + TL KITD G   F+
Sbjct: 310 LSRADLEATLRKITDLGADGFI 331


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 689 LDSEIVKHLSNNC 651
           LDSE V  L NNC
Sbjct: 91  LDSEQVNRLVNNC 103


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 277 PFNIWFLRTSLCSR 236
           PFN W++ T + SR
Sbjct: 294 PFNGWYMSTEIGSR 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,646
Number of Sequences: 438
Number of extensions: 4567
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)