Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1814
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 44 1e-04
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 41 9e-04
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 33 0.30
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 33 0.30
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 33 0.30
Z78013-2|CAB01424.1| 453|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66522-4|CAC70090.1| 349|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL031627-1|CAA20945.1| 550|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 6.5
U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical pr... 28 6.5
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 117 IEMLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLRI 260
I LP+E+L+ +F +LP LL C +VS R+ +++ VW+ +Y +
Sbjct: 162 INRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNL 209
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/103 (25%), Positives = 46/103 (44%)
Frame = +3
Query: 123 MLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLRILQNMAKSKESQKTL 302
+LP EVL+ +F +L L V + W LA D + W+ + L Q K+ +
Sbjct: 59 VLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLA 118
Query: 303 QVIGTHSECIHNLKLQYMHTYSSIRMLLEKCDNIFSLDLCMCR 431
+ G + + + +H S++R +C N+ L L C+
Sbjct: 119 RRCGGFLKELSLKGCENVHD-SALRTFTSRCPNLEHLSLYRCK 160
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/103 (25%), Positives = 46/103 (44%)
Frame = +3
Query: 123 MLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLRILQNMAKSKESQKTL 302
+LP EVL+ +F +L L V + W LA D + W+ + L Q K+ +
Sbjct: 59 VLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLA 118
Query: 303 QVIGTHSECIHNLKLQYMHTYSSIRMLLEKCDNIFSLDLCMCR 431
+ G + + + +H S++R +C N+ L L C+
Sbjct: 119 RRCGGFLKELSLKGCENVHD-SALRTFTSRCPNLEHLSLYRCK 160
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 117 IEMLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLR 257
IE LPD+VL IF+YL + V +RW+ +++ +W+ + R
Sbjct: 49 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFR 95
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 117 IEMLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLR 257
IE LPD+VL IF+YL + V +RW+ +++ +W+ + R
Sbjct: 32 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFR 78
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 117 IEMLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLR 257
IE LPD+VL IF+YL + V +RW+ +++ +W+ + R
Sbjct: 66 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFR 112
>Z78013-2|CAB01424.1| 453|Caenorhabditis elegans Hypothetical
protein F15B9.6 protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 524 LIIQYDKFKGLNTLELPXFGLSRANCNTLLDLKNLCHIEI-EKINNLGTEYILQLILSKQ 700
L ++ D +G L P F +S TL +L+N C ++I E +NL E + +L LS +
Sbjct: 92 LKLKSDAKEGKIILAKPKFDISMNMKQTLRELENNCTVQIMEGDDNLRVEQLFKLTLSNR 151
Query: 701 NI 706
I
Sbjct: 152 CI 153
>Z66522-4|CAC70090.1| 349|Caenorhabditis elegans Hypothetical
protein F14E5.6 protein.
Length = 349
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 178 KQSSGRYLNIAIKTSSGNISMKLHSPMPSQSVFEYREYKSCP 53
K ++L + I T+ N L++P+ S +FE K+CP
Sbjct: 184 KTEERKWLTVPITTNHANQDKLLNTPVHSCDIFESAMEKACP 225
>AL031627-1|CAA20945.1| 550|Caenorhabditis elegans Hypothetical
protein Y102A5C.4 protein.
Length = 550
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -1
Query: 238 QTAVSLASLFHL*DTFSHTSKQSSGRYLNIAIKTSSGNISMKL 110
+ A ++ + ++ T SH SK++ +L KTS G++ +KL
Sbjct: 227 EAATAVTLMTYMQRTISHPSKENIRNFLRECEKTSPGHLGLKL 269
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 345 LQYMHTYSSIRMLLEKCDNIFSLDLCM 425
L + TYSSIRML C +I +D C+
Sbjct: 748 LGFQCTYSSIRMLYFCCRDIVRIDKCL 774
>U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical
protein F56F10.2 protein.
Length = 377
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 138 VLIAIFKYLPLDCLLVCENVSQRWKRLARDTA 233
+L +FKYL +D LL C+ V +W + A
Sbjct: 106 ILADVFKYLDIDDLLNCKLVCWKWNATIGENA 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,300
Number of Sequences: 27780
Number of extensions: 371797
Number of successful extensions: 1119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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