Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1813
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       25   3.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   7.0  

>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 2   DEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQG 112
           D+E IER+ ++   L AD  +A      +LLG    G
Sbjct: 8   DKEAIERSKNIDRALRADGERAASEVKLLLLGAGESG 44



 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 401 INSCMSLSSAMDELCASPWYVE-NLTFFIN 315
           +N  +      D +C S W+VE ++  F+N
Sbjct: 239 MNRMIESMKLFDSICNSKWFVETSIILFLN 268


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 114 PP*EKPPSRTLSAGTPALTSSAINPWT 34
           PP   P + T++ GT   T +  NP T
Sbjct: 410 PPSVAPTTSTVAPGTTTTTPTGANPGT 436


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,071
Number of Sequences: 2352
Number of extensions: 16780
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)