Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1812
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    27   0.64 
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    25   2.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.5  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   5.9  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   5.9  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   5.9  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   5.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.9  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   7.9  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -2

Query: 759 ALTFREYIHQGLPT*SELCILESVRSPSQAVSYFEDISCLSRSFTKPLSVSPGHTTRHRT 580
           +LT RE++ +GLP   +  I E  R    A++     S    S     +  P H   HR+
Sbjct: 324 SLTVREFVDRGLP---KQRIHERARFDPSALTSHRSSSANCSSAAPKSTAHPDHFLDHRS 380

Query: 579 P 577
           P
Sbjct: 381 P 381


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 419 YGEGSRRARRCHREHGL 469
           YG+GSR  R C   HG+
Sbjct: 14  YGQGSRFWRACSNNHGM 30


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 681 PSQAVSYFEDISCLSRSFTKPLSVSPGHTTRHRTP 577
           PS   S  E  S ++RSF         HTT H++P
Sbjct: 382 PSVYKSLAEAASKMARSFIPAREPEDLHTTTHKSP 416


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +1

Query: 82  LITGAASGIGLAYSEELLKQGAKVSLCD 165
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 41  VVIGGGSG-GLACAKQAVQLGAKVAVLD 67


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +1

Query: 82  LITGAASGIGLAYSEELLKQGAKVSLCD 165
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 17  VVIGGGSG-GLACAKQAVQLGAKVAVLD 43


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +1

Query: 82  LITGAASGIGLAYSEELLKQGAKVSLCD 165
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 14  VVIGGGSG-GLACAKQAVQLGAKVAVLD 40


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 655 RHKLLVKILHQTTVRESRAHDEASHSGHIDVVLIPVSSGE 536
           +H  ++ IL +T  +E       +  GH+ + L P+S  E
Sbjct: 68  KHAEMMPILRETVKKEDVQRIRTNFKGHLLLELAPMSHQE 107


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 425  EGSRRARRCHREHGLYSICETSSV 496
            +G+R A   H  H L+  C  SSV
Sbjct: 1862 DGTRSAIHMHAAHSLFPSCLCSSV 1885


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 763 GRFDLSRVHPPGS 725
           G++DLS + PPGS
Sbjct: 319 GKYDLSALSPPGS 331


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,544
Number of Sequences: 2352
Number of extensions: 16777
Number of successful extensions: 39
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)