Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1811
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.2  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   7.3  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    23   7.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.6  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   9.6  
AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    23   9.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.6  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 168 YFFFFLDTIVIVILVQKVICKGFLF 94
           YF +F  ++  + L+ K++  GFLF
Sbjct: 891 YFDYFFTSVFTIELLLKLVSYGFLF 915


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 8/26 (30%), Positives = 19/26 (73%)
 Frame = -1

Query: 595 FFNDGKVLNRKHNVRQSSKSRKASTN 518
           +F + ++ N+K++ RQS+++   S+N
Sbjct: 317 WFQNRRMKNKKNSQRQSAQANSGSSN 342


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 312 TFLSPLSVSRFSGVYSFQNKIRLKSFKDSCSF 217
           T +SP +V RFS    F +   LK + D C F
Sbjct: 61  TGVSPEAVKRFSDADPFDDNRALKCYMD-CMF 91


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 601 GTFFNDGKVLNRKHNVRQSSKSRKASTN 518
           GT+F DG  +NR+++ +       +S N
Sbjct: 829 GTYFMDGTAVNRQNHAKDLGVLLDSSLN 856


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -2

Query: 477 WIVPQKLSHLAIFSLCSCTTNFLLI 403
           W++   ++ + +F++C    NFL++
Sbjct: 486 WMIKMMVTVVIVFTICWLPFNFLMV 510


>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 312 TFLSPLSVSRFSGVYSFQNKIRLKSFKDSCSF 217
           T +SP ++ RFS    F +   LK + D C F
Sbjct: 61  TGVSPEAIKRFSDADPFDDNRALKCYMD-CMF 91


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = -1

Query: 634  VSLLHKNDWSLGTFFNDGKVLNRKHNVRQSSKSRKASTNVGYFPLLCDQCL 482
            +S L  N+ S       G V+N ++N+     +   +T  G  PLL    L
Sbjct: 886  ISGLASNNSSSSNLVAAGMVINDENNLHYHRSASPKATVAGGLPLLPSNAL 936


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,572
Number of Sequences: 2352
Number of extensions: 15285
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)