Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1806X
         (559 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +2

Query: 425 RSRKPP-VSRNRELTDKYLHYNPLKMGYPLFTMAESKRV 538
           R R P  +  N       LHY   + G+  +TM + + V
Sbjct: 113 RMRAPSFICENETRQGLTLHYRSKRRGFVYYTMGQIREV 151


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 405 SLGRAVQDHVNRPSVVTESSQTNIFTIIH*KWVTLYS 515
           S+ R   DH N PS+        +  I+    +T Y+
Sbjct: 391 SIFRQTDDHQNSPSIFISDDNQKLTGIVQISNMTEYN 427


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 551 GFSTAPASIPPS*IEGNPFLMDYSEDI 471
           GF    AS+ P     NP+  +Y E++
Sbjct: 262 GFDDYMASLTPDTNRRNPWFSEYWEEV 288


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 551 GFSTAPASIPPS*IEGNPFLMDYSEDI 471
           GF    AS+ P     NP+  +Y E++
Sbjct: 352 GFDDYMASLTPDTNRRNPWFSEYWEEV 378


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 55  QLNLYVLFFSVRFFLEPN 108
           QLNL +L   V+ F+ PN
Sbjct: 118 QLNLPILKDGVQIFIAPN 135


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 55  QLNLYVLFFSVRFFLEPN 108
           QLNL +L   V+ F+ PN
Sbjct: 156 QLNLPILKDGVQIFIAPN 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,538
Number of Sequences: 438
Number of extensions: 2937
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)