Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1799
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 123 2e-28
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 120 9e-28
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 112 2e-25
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 41 0.001
09_04_0652 - 19227686-19227926,19229368-19232294 39 0.005
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 38 0.006
08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736 38 0.011
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 36 0.025
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 36 0.044
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 36 0.044
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 35 0.058
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 34 0.10
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 33 0.18
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 33 0.18
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 33 0.24
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 33 0.24
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 33 0.31
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 32 0.41
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 32 0.54
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 31 0.72
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 31 0.95
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 31 0.95
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 30 1.7
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 30 1.7
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 29 3.8
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 28 6.7
02_05_1146 - 34440647-34441674,34442138-34443896 28 6.7
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 28 6.7
01_03_0038 + 11862743-11862884,11863145-11863704,11863733-118637... 28 8.8
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 123 bits (296), Expect = 2e-28
Identities = 58/92 (63%), Positives = 70/92 (76%), Gaps = 3/92 (3%)
Frame = +2
Query: 242 FRISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRT---KETLLTCLADLFYSIATQ 412
F + +FGNTCY NSVLQALYFC PFRE++LEY A NK T ++ +LTCLADLF I+ Q
Sbjct: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLADLFSQISNQ 82
Query: 413 KKKVGSIAPKKFIARLRKEKEEFDNYMQQXAH 508
KKK G IAPK+FI RL+K+ E F +YM Q AH
Sbjct: 83 KKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAH 114
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Frame = +1
Query: 511 FLNFLINHINEI------ILAERNQSTLKVQKNNSGE-NVTCNGSVPHNTEPTWVHEIFQ 669
FLNFL+N + +I ++AE +++ ++KN++G NV NG+ PT VH+ FQ
Sbjct: 116 FLNFLLNELVDILEKESKVVAEPCENS-SLKKNSNGPINVQLNGTKKEPV-PTLVHKCFQ 173
Query: 670 GTLTSETRCLNCETVSSKD 726
G LT+ETRCL CETV+ +D
Sbjct: 174 GILTNETRCLRCETVTDRD 192
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 174 MGANISQLERDIGSEQFPPNEHYFGL 251
MGA S+LE+ +G EQFP E YFGL
Sbjct: 1 MGAASSRLEKALG-EQFPEGERYFGL 25
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 120 bits (290), Expect = 9e-28
Identities = 56/92 (60%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Frame = +2
Query: 242 FRISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKR---TKETLLTCLADLFYSIATQ 412
F + +FGNTCY NSVLQALYFC PFREK+LEY A NK +E LLTCLADLF ++
Sbjct: 23 FGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLTCLADLFMQVSQS 82
Query: 413 KKKVGSIAPKKFIARLRKEKEEFDNYMQQXAH 508
KKK G IAPK+F+ R++K+ E F +YM Q AH
Sbjct: 83 KKKTGVIAPKRFVQRVKKQNELFRSYMHQDAH 114
Score = 54.8 bits (126), Expect = 7e-08
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Frame = +1
Query: 511 FLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGSVPH-----NTEP--TWVHEIFQ 669
FLNFL+N + +I+ E N + Q ++S E V NG V EP T VH+ FQ
Sbjct: 116 FLNFLLNELVDILEKESNAAKDSPQ-SSSPEKVP-NGPVQPLANGVRKEPPVTLVHKNFQ 173
Query: 670 GTLTSETRCLNCETVSSKD 726
G LT+ETRCL CETV+++D
Sbjct: 174 GILTNETRCLRCETVTARD 192
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 174 MGANISQLERDIGSEQFPPNEHYFGL 251
MGA+ S+LE+ +G +QFP E YFGL
Sbjct: 1 MGASGSKLEKALG-DQFPEGERYFGL 25
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 112 bits (270), Expect = 2e-25
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Frame = +2
Query: 242 FRISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKET---LLTCLADLFYSIATQ 412
F + +FGNTCY NSVLQALY C PFRE++LEY A K T+++ LLTCLADLF I
Sbjct: 72 FGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTCLADLFSQITLA 131
Query: 413 KKKVGSIAPKKFIARLRKEKEEFDNYMQQXAH 508
KK+ G +APK+F+ R+RK+ E F +YM Q AH
Sbjct: 132 KKRTGVLAPKRFVQRVRKQNELFRSYMHQDAH 163
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 511 FLNFLINHINEII-----LAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGT 675
F NFL+N I +I+ A + T + +N N NG+ T VH FQG
Sbjct: 165 FWNFLVNDIIDILEEDCRTANSSPETTPEEVSNGAANALANGA-RERPLVTLVHRTFQGI 223
Query: 676 LTSETRCLNCETVSSKD 726
LT+ET+CL C+T+++KD
Sbjct: 224 LTNETKCLMCDTITAKD 240
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 FRISHFGNTCYSNSVLQALYFCRPFREKVL-EYKAKNKRTKETLLTCLADLFYSIATQKK 418
F + + GN+CY+N+VLQ L F RP +L +KN KE C + Q K
Sbjct: 450 FGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQGK 509
Query: 419 KVGSIAPKKFIARLRKEKEEFDNYMQQXAH 508
+++P ++ L F Q+ AH
Sbjct: 510 I--ALSPTGILSHLPDIGSSFGPGKQEDAH 537
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
+ + GNTC+ N+V+Q+L R K+L LL L LF + G
Sbjct: 227 LPNLGNTCFFNAVMQSLLALDRLRSKMLGPDVPT----GALLMSLKKLFMETSASNDVGG 282
Query: 428 SIAPKKFIARLRKEKEEFDNYMQQXAH 508
+++PK + + + +F + Q +H
Sbjct: 283 ALSPKNLFSNICSKYPQFRGFQMQDSH 309
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/87 (33%), Positives = 42/87 (48%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
+++ G TCY+NS+LQ LY FR + + + +L LA LF + + K
Sbjct: 129 LTNLGATCYANSILQCLYMNTSFRLGIFSLEPDILK-MHPVLDQLARLFAQLHSSKMAFI 187
Query: 428 SIAPKKFIARLRKEKEEFDNYMQQXAH 508
AP FI L E DN +QQ +H
Sbjct: 188 DSAP--FIKTL-----ELDNGVQQDSH 207
>08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736
Length = 869
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
I + GNTCY N++LQ L+ R ++L A + + + L +LF + +
Sbjct: 305 IPNLGNTCYVNALLQCLFVLEKLRARMLASDAPS----GFVGSALKELFQEVNSVNNAQR 360
Query: 428 SIAPKKFIARLRKEKEEF 481
+ P KF+ R+R +F
Sbjct: 361 PLNPTKFLDRVRMLNAQF 378
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPF 316
+ +FGNTCY NSVLQ L + PF
Sbjct: 140 LQNFGNTCYLNSVLQCLTYTEPF 162
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 628 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSK 723
P E + VH IF G L S+ RC C S+K
Sbjct: 229 PSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNK 260
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 35.5 bits (78), Expect = 0.044
Identities = 26/87 (29%), Positives = 36/87 (41%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
I +FGNTCY N+VLQ L R ++ A L L DLF + +
Sbjct: 207 IPNFGNTCYLNAVLQCLLVLGKLRARMSGPDA--PPPSGMLGIILHDLFVATESVSYTRD 264
Query: 428 SIAPKKFIARLRKEKEEFDNYMQQXAH 508
+ P + +R K EF Q +H
Sbjct: 265 LLDPVMLLGCVRHYKSEFQGNTMQDSH 291
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKET 367
+ + GNTCY NSVLQ L + PF + K K+ E+
Sbjct: 102 LQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSLPSES 141
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 35.1 bits (77), Expect = 0.058
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +2
Query: 254 HFGNTCYSNSVLQALYFCRPFREKVLEY--KAKNKRTKETLLTCLADLFYSIATQKKKVG 427
+ GNTCY NS LQ L+ + +L Y + + + + V
Sbjct: 108 NLGNTCYMNSTLQCLHSVPELKSALLSYSDNVRGNGVDQASHNLTVATRNTFGELDQSVR 167
Query: 428 SIAPKKFIARLRKEKEEF-----DNYMQQXA 505
+AP F+ LRK+ +F + YMQQ A
Sbjct: 168 PVAPLLFLQTLRKKYPQFAQQQNNVYMQQDA 198
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 242 FRISHFGNTCYSNSVLQALYFCRPFREKVLE 334
F + + GN+CY+N+VLQ L F RP + E
Sbjct: 379 FGLVNLGNSCYANAVLQCLAFTRPLTAYLTE 409
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 GNTCYSNSVLQALYFCRPFREKVLEY-KAKNKRTKETLLTCLADLFYSIATQKKKVGS 430
G TCY NS+LQ LY FR+ V +N ++ L LFY + V +
Sbjct: 195 GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVAT 252
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 GNTCYSNSVLQALYFCRPFREKVLEY-KAKNKRTKETLLTCLADLFYSIATQKKKVGS 430
G TCY NS+LQ LY FR+ V +N ++ L LFY + V +
Sbjct: 205 GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDNSVAT 262
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
I + GNTCY NS+LQ L R +L A L + L LF + G
Sbjct: 246 IPNLGNTCYLNSLLQCLLVLGRLRAGILGLDA----PLGLLGSSLRSLFDDADSVNNAGG 301
Query: 428 SIAPKKFIARLRKEKEEF 481
+ P+K +A +R EF
Sbjct: 302 LLDPEKLLACVRMLNPEF 319
>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 269 CYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTC-LADLFYSIATQKKKVG-SIAPK 442
C+ N ++Q+L+ + FR+ L+ + +K ++ C L D+F ++ ++ G ++AP
Sbjct: 1284 CFLNVIIQSLWHLKRFRDGFLKTSSLHKHVEDPCAVCALYDIFTDLSKASEEQGEAVAPT 1343
Query: 443 KFIARLRK 466
L K
Sbjct: 1344 SLRIALSK 1351
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 32.7 bits (71), Expect = 0.31
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
I++ GNTCY NS++Q L R ++L + + T L T L LF + G
Sbjct: 303 ITNLGNTCYLNSLVQCLLALGRLRARML----RPEDTTGRLGTVLRYLFQDTDSVNNSGG 358
Query: 428 SIAPKKFIARLR 463
+ P + R+R
Sbjct: 359 LLNPSGLLRRVR 370
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/85 (28%), Positives = 37/85 (43%)
Frame = +2
Query: 254 HFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSI 433
+ GNTCY N++LQ L+ R ++L A + L L +LF + +
Sbjct: 344 NLGNTCYINALLQCLFVLGKLRARMLAPDAPS----YILGYELKELFQEVNNVDNAQLQL 399
Query: 434 APKKFIARLRKEKEEFDNYMQQXAH 508
P KF A +R F + Q +H
Sbjct: 400 NPTKFFACIRVLDARFISSDMQDSH 424
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLF 394
I + GNTCY NS++Q L R ++L A + TL T L DLF
Sbjct: 300 IPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPS----GTLGTALHDLF 344
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/87 (29%), Positives = 34/87 (39%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVG 427
I + GNTCY NS++Q L R ++L TL T L DLF G
Sbjct: 195 ILNLGNTCYLNSLVQCLLVLGKLRARML----GPDTPLGTLGTILYDLFDQTYGVNNTGG 250
Query: 428 SIAPKKFIARLRKEKEEFDNYMQQXAH 508
+ +A +RK F Q H
Sbjct: 251 LLDMTWLLAYVRKSDSRFIGAFMQDNH 277
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 31.1 bits (67), Expect = 0.95
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVL-----EYKAKNKRTKETLLTCLADLFYSIATQ 412
+ + GNTC+ NS +Q+L P E L E +N + LL L D + +
Sbjct: 313 LHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQELLAFLLDGLHEDLNR 372
Query: 413 KKKVGSIAPKKFIARLRKE-KEEFDNY 490
KK I K R +E EE NY
Sbjct: 373 VKKKPYIEAKDADGRPDEELAEECWNY 399
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 31.1 bits (67), Expect = 0.95
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 203 RYRVRAVPT*RTLFRISHFGNTCYSNSVLQALYFCRPFR-EKVLEYKAKNKRTKETLLTC 379
+Y VR + R LF GN+CY+N+VLQ L +P +L +K+ TK T
Sbjct: 344 QYEVRGISP-RGLFNC---GNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCNTKTQAPTL 399
Query: 380 LADLFYSI 403
L + S+
Sbjct: 400 LGVVVKSL 407
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 248 ISHFGNTCYSNSVLQALYFCRPFREKVLEYKAKN 349
+ + GN C+ NS LQAL C PF + + + +N
Sbjct: 318 LKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQN 351
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 GNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTC-LADLFYSIATQKKKVGSIA 436
GN+C++N VLQ L RP +L + K C L +L I + + A
Sbjct: 210 GNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASESMHPFA 269
Query: 437 PKKFIARLRKEKEEFDNYMQQXAH 508
PK ++ L Q+ AH
Sbjct: 270 PKNILSHLPNIGGNLGFGRQEDAH 293
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Frame = +2
Query: 254 HFGNTCYSNSVLQALY----FCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKK 421
+ GNTC+ NS +Q L F R FRE ++ N + ++ LA F + +
Sbjct: 353 NLGNTCFMNSAIQCLVHTPEFARYFREDY--HREINWQNPLGMVGELALAFGELLRKLWA 410
Query: 422 VG--SIAPKKFIARLRKEKEEFDNYMQ 496
G ++P+ F +L + +F Y Q
Sbjct: 411 PGRTPVSPRPFKTKLSRFAPQFSGYNQ 437
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 254 HFGNTCYSNSVLQALYFCRPFREKVL 331
+ GNTCY N++LQ L R ++L
Sbjct: 573 NLGNTCYLNALLQCLLVLGKLRARIL 598
>02_05_1146 - 34440647-34441674,34442138-34443896
Length = 928
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 221 VPT*RTLFRISHFGNTC-YSNSVLQALYFCRPFREKVLEYKAKNK-RTKETLLTCLADLF 394
+P R L ++H T Y N+VL ++ PFR+K + + K R+KE L L D
Sbjct: 260 IPGARMLEILTHVAGTDKYRNAVLGSIGRILPFRQKDFTFPSYRKFRSKEAGL-YLPDPA 318
Query: 395 YSIATQK 415
Y IA +
Sbjct: 319 YDIAVDR 325
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 260 GNTCYSNSVLQALYFCRPFRE 322
G TCY NS+LQ LY FR+
Sbjct: 178 GATCYMNSLLQTLYHIPYFRK 198
>01_03_0038 +
11862743-11862884,11863145-11863704,11863733-11863777,
11864174-11864563
Length = 378
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 266 TCYSNSVLQALYFCRPFREKVLEY 337
TC SNSVLQ L+FC F E Y
Sbjct: 279 TC-SNSVLQILHFCLEFEEGCYVY 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,027
Number of Sequences: 37544
Number of extensions: 333513
Number of successful extensions: 705
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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