Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1796
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.8  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   5.8  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   7.7  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   7.7  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 407 VPSGCPLTPLKFLFLIDRV 463
           VP GC L+PL F   I+ V
Sbjct: 672 VPQGCVLSPLLFSLFINDV 690


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 181 HNAR*GTSFQKNRIKMRSFKDLSIHRDRY 95
           H++  G + +K+ +   +F   SIH DRY
Sbjct: 51  HHSEEGPARRKSNLHNDNFDTSSIHSDRY 79


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 450 KNKNFRGVKGHPDGTKFLSI 391
           K K+F    GHPDG   L +
Sbjct: 128 KYKSFAEAAGHPDGLAVLGV 147


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 20/81 (24%), Positives = 31/81 (38%)
 Frame = -2

Query: 367 FFKVIIINYGITRTNRIRAMSGGSIGYEQCHAISAYTLLVRMTDLKSVVTTFRKNFFRLA 188
           F  V +    I   NR  A  GG+   ++  A++    L  M        TF      L+
Sbjct: 64  FISVPVKPVPIDTANRFGADDGGASLTQKTCALNGEYCLTHMECCSGNCLTFSYKCVPLS 123

Query: 187 PFHNAR*GTSFQKNRIKMRSF 125
           P  +A  G  +   +I M +F
Sbjct: 124 PSDSAMTGPLYSTPQISMVNF 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,475
Number of Sequences: 2352
Number of extensions: 13564
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)