Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1796
(752 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 24 1.3
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 24 1.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.4
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 310 MSGGSIGYEQCHAISAYTLLVRMTDLKSVVTT 215
MSG S Y CHA AY ++V L S TT
Sbjct: 453 MSGTSNKYGVCHADDAY-MVVDTPFLASTTTT 483
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2
Query: 310 MSGGSIGYEQCHAISAYTLLVRMTDLKSVVTT 215
MSG S Y CHA AY ++V L S TT
Sbjct: 453 MSGTSNKYGVCHADDAY-MVVDTPFLASTTTT 483
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 655 TSIHNQY*SANQISFVNKKNYLNHALQY 738
+S+ N Y +N ++ N NY N+ Y
Sbjct: 83 SSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 527 NLLLISHYSMDVIIHINLPL 468
N+LL HYSM+ ++ L +
Sbjct: 236 NILLRRHYSMNSTTYVTLTI 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,075
Number of Sequences: 438
Number of extensions: 4680
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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