Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1792
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1805|AAF50164.2|  534|Drosophila melanogaster CG32055-P...    34   0.24 
BT022626-1|AAY55042.1|  192|Drosophila melanogaster IP06960p pro...    33   0.55 
AE014134-2348|AAF53300.1|  192|Drosophila melanogaster CG16957-P...    33   0.55 
AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH0234...    29   6.8  
AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA...    29   6.8  
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    29   8.9  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    29   8.9  

>AE014296-1805|AAF50164.2|  534|Drosophila melanogaster CG32055-PA
           protein.
          Length = 534

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 12/42 (28%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query: 506 RNFKWLFINVFNLLKTLYMHALYMQHVHTGL-YVIPIIKLRN 628
           R+F+W  + V   L+ L++H+ +++H+  G+ Y +P +++ N
Sbjct: 204 RDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLN 245


>BT022626-1|AAY55042.1|  192|Drosophila melanogaster IP06960p
           protein.
          Length = 192

 Score = 32.7 bits (71), Expect = 0.55
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 507 LSVNLTLISVYIFLKLKFFCNVLFFRDPSFSD 412
           + V L ++S+ +FLKL FF   L   +P FSD
Sbjct: 27  IDVTLLIMSIVVFLKLGFFARRLSREEPDFSD 58


>AE014134-2348|AAF53300.1|  192|Drosophila melanogaster CG16957-PA
           protein.
          Length = 192

 Score = 32.7 bits (71), Expect = 0.55
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 507 LSVNLTLISVYIFLKLKFFCNVLFFRDPSFSD 412
           + V L ++S+ +FLKL FF   L   +P FSD
Sbjct: 27  IDVTLLIMSIVVFLKLGFFARRLSREEPDFSD 58


>AF181622-1|AAD55408.1|  694|Drosophila melanogaster BcDNA.GH02340
           protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 99  LVSPGSRGGISQLMQAPAKWKTVHGKLNSLWSKAKNLNL 215
           L+  G   G+  L Q PAK  T    +  LW KA  + L
Sbjct: 272 LLLVGDSNGLIHLYQLPAKGNTALALVKPLWEKADRMGL 310


>AE014296-481|AAF47665.1|  694|Drosophila melanogaster CG12182-PA
           protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 99  LVSPGSRGGISQLMQAPAKWKTVHGKLNSLWSKAKNLNL 215
           L+  G   G+  L Q PAK  T    +  LW KA  + L
Sbjct: 272 LLLVGDSNGLIHLYQLPAKGNTALALVKPLWEKADRMGL 310


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
           transmembrane protein protein.
          Length = 3004

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 602 VIPIIKLRNSRYFDAPHFIPINRETMYLDGSC 697
           V+P   LRNS    APH+ P +    ++D  C
Sbjct: 127 VMPGFPLRNSHSAHAPHYSPYSPSRFHIDKRC 158


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
           protein.
          Length = 3004

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 602 VIPIIKLRNSRYFDAPHFIPINRETMYLDGSC 697
           V+P   LRNS    APH+ P +    ++D  C
Sbjct: 127 VMPGFPLRNSHSAHAPHYSPYSPSRFHIDKRC 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,591,582
Number of Sequences: 53049
Number of extensions: 679808
Number of successful extensions: 1573
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)