Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1789
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.9  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    25   1.9  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.3  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    24   4.4  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   7.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +2

Query: 257 LIFSMLTGGSQGYTTLFHFLNNNWAVLKEKFASKTNLWDSLISAATGQFTTQEGLDLVSN 436
           ++  +L  GSQ   T+  F  N+W  +++++ S   L D++IS    +F     L  +  
Sbjct: 761 MLVVVLIYGSQKEVTVLQFTGNDW--VEKEYISDFPL-DAVISVGK-KFVVLCDLKTLRV 816

Query: 437 LYVAHQGEFGSAE 475
           L + H+G     E
Sbjct: 817 LTINHKGNLNDTE 829


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 114 FPPSRKQSERTYLLKT 161
           FPPS+KQSE  Y  +T
Sbjct: 23  FPPSKKQSELPYCCQT 38


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 335 KLPNCCSRNGTGSCTPV 285
           K P  CS NG+ S TP+
Sbjct: 233 KSPRLCSSNGSSSATPL 249


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 335 KLPNCCSRNGTGSCTPV 285
           K P  CS NG+ S TP+
Sbjct: 233 KSPRLCSSNGSSSATPL 249


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 532 NIPVIEKWLDDYVARYGVND 591
           N+P+   W+DD++ +  + D
Sbjct: 194 NVPMFRGWIDDHLRQRNITD 213


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 588 VDSVSSYIVI-EPFFYDRYVLD 526
           V ++  YI + +PFFY +YV D
Sbjct: 152 VMALERYIALAKPFFYHKYVTD 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,617
Number of Sequences: 2352
Number of extensions: 18401
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)