Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1788X
(414 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 22 3.2
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 22 3.2
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 3.2
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 4.2
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 5.5
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 5.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 7.3
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.3
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 7.3
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 20 9.6
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 40 NLQVDHKRRIVLV*VLCSLDQSVKNW 117
N + +RRI + LC ++ +K W
Sbjct: 30 NRYLTRRRRIEIAHALCLTERQIKIW 55
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 40 NLQVDHKRRIVLV*VLCSLDQSVKNW 117
N + +RRI + LC ++ +K W
Sbjct: 30 NRYLTRRRRIEIAHALCLTERQIKIW 55
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 40 NLQVDHKRRIVLV*VLCSLDQSVKNW 117
N + +RRI + LC ++ +K W
Sbjct: 292 NRYLTRRRRIEIAHALCLTERQIKIW 317
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 40 NLQVDHKRRIVLV*VLCSLDQSVKNW 117
N + +RRI + LC ++ +K W
Sbjct: 30 NHYLTRRRRIEIAHALCLTERQIKIW 55
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 5.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 223 ISNVFSFSSQQLIPFFSNLNDVHFNHFERKFKYLISSSLQIGREN 89
+ NV S +L P N +H+ H K + SS GRE+
Sbjct: 504 VPNVNSVQWPRLNP---NEKSLHYLHIAGPGKIQMDSSTNFGRED 545
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 5.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 223 ISNVFSFSSQQLIPFFSNLNDVHFNHFERKFKYLISSSLQIGREN 89
+ NV S +L P N +H+ H K + SS GRE+
Sbjct: 504 VPNVNSVQWPRLNP---NEKSLHYLHIAGPGKIQMDSSTNFGRED 545
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.6 bits (41), Expect = 7.3
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +2
Query: 359 VIIAKFHSGYLLAHPWLF 412
+++ F+ YLL W+F
Sbjct: 87 ILVMPFNVAYLLLGKWIF 104
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.6 bits (41), Expect = 7.3
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +2
Query: 359 VIIAKFHSGYLLAHPWLF 412
+++ F+ YLL W+F
Sbjct: 87 ILVMPFNVAYLLLGKWIF 104
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 17 MICL*TNVIYKWITNGG 67
M+C+ +IY W T G
Sbjct: 540 MLCIPGYMIYIWFTTSG 556
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 17 MICL*TNVIYKWITNGG 67
M+C+ +IY W T G
Sbjct: 593 MLCIPGYMIYIWFTTSG 609
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 20.6 bits (41), Expect = 7.3
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +2
Query: 359 VIIAKFHSGYLLAHPWLF 412
+++ F+ YLL W+F
Sbjct: 87 ILVMPFNVAYLLLGKWIF 104
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 327 GSTLGMLRVFTS 362
G +GM R+FTS
Sbjct: 153 GKNIGMKRIFTS 164
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,948
Number of Sequences: 438
Number of extensions: 1871
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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