Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1783
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    31   0.038
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    28   0.27 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.61 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.61 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.61 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.61 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.81 
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    24   3.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   3.3  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   7.5  
AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    23   7.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.5  

>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 30.7 bits (66), Expect = 0.038
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 315 SGRASVSC*PPTCPGTGACIQVKQAISAFPGTALLQILEE 196
           +GR +V C PP  PG  AC  +K  +     T    IL E
Sbjct: 31  NGRQNVGCNPPGIPGGPACAGLKPMVITINSTLQTLILSE 70


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 560 GRVSSGQECRRAGSVSSQLVCKCC 489
           G   S ++CR  G + SQL C  C
Sbjct: 18  GAEFSAEDCRELGLIKSQLFCSAC 41


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 61  VSDACKTTYEEIKKDKKHRYVVFYIRD 141
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 61  VSDACKTTYEEIKKDKKHRYVVFYIRD 141
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 61  VSDACKTTYEEIKKDKKHRYVVFYIRD 141
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 47  ILSACSPYFEQIFVENKHPHPIIYLRD 73


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 61  VSDACKTTYEEIKKDKKHRYVVFYIRD 141
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHLHPIIYLRD 121


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 330 DTAKVKKKMLYSSSFDALK 386
           DTAKV +K+ YSS+F  L+
Sbjct: 257 DTAKVFQKIFYSSAFSKLR 275


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 419 LDVLLNSDKGLFXSVERARVQH 354
           +D+L  +D G F  VE  R+ H
Sbjct: 361 MDILERNDNGYFLFVEGGRIDH 382


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 402 VQKYIQATDLSEASQEAVEEKLR 470
           ++KY++  DLSE  +E ++ +L+
Sbjct: 896 IEKYLKPLDLSEKQKEEMKSQLK 918


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 482 PINSIYTRAATKPNPLSDTPALTTR--GHDTTSRLVL 586
           P + I TRA+   NPLS+T  + T    +D+ S L L
Sbjct: 88  PGDRIMTRASFNLNPLSNTYTIYTSVLANDSGSELEL 124


>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 574 ASGVVAACRQGRSVGERVRFRRSSCVNAVYWRSVAR 467
           A  V+ A     SVGE   F +   V A+Y R +++
Sbjct: 4   AFAVLIAIAASCSVGEAKTFTKCELVKAMYNRGISK 39


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = +3

Query: 267  QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQ 446
            +C G  E ++      M  CP  A++++K+L  ++ DA+    +     +Q+ +      
Sbjct: 967  RCTGVPETAEHA----MFECPRFAEIRQKLLGEANTDAITPETLQFH-LLQSQEKWSRIA 1021

Query: 447  EAVEEKLRATDRQ*TAFTHELRRNRTRSPT 536
            EA ++   A  R        L  + T SP+
Sbjct: 1022 EAAKQITSALQRDWNEERARLAVSSTLSPS 1051


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,703
Number of Sequences: 2352
Number of extensions: 11310
Number of successful extensions: 42
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)