Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1782X
(330 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 61 2e-10
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 61 2e-10
03_06_0479 + 34217170-34217172,34217337-34217786 60 5e-10
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 56 7e-09
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 55 2e-08
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 54 3e-08
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 51 2e-07
05_01_0103 + 686770-687017,687120-687270 50 3e-07
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 46 5e-06
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 34 0.031
10_01_0274 - 2901033-2901778,2902475-2902634 28 2.0
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 2.0
05_07_0055 - 27374028-27374080,27374205-27374295,27374930-273754... 27 2.7
04_03_0226 - 12977443-12977895 27 4.7
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 26 6.2
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 26 6.2
06_01_0769 - 5745324-5746970 26 6.2
02_01_0497 + 3607227-3607462,3607600-3607661,3608138-3608286,360... 26 6.2
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 26 6.2
09_06_0099 - 20854828-20855117,20855231-20855423,20855507-208556... 26 8.3
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 26 8.3
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634... 26 8.3
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 60.9 bits (141), Expect = 2e-10
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 30 ASGVTVSDACKTTYEEIKNDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 206
+SG+ V+ CK T+ E++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 207 TGECRYGLFDFEY 245
+CRY ++DF++
Sbjct: 69 -SDCRYAIYDFDF 80
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 60.9 bits (141), Expect = 2e-10
Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 30 ASGVTVSDACKTTYEEIKNDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 206
+SGV + D CK + E+++ + HR++ F + ++ K+I V+ +G+R YE F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 207 TGECRYGLFDFEY 245
G+CR+ ++DF++
Sbjct: 82 -GDCRFAIYDFDF 93
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 59.7 bits (138), Expect = 5e-10
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 33 SGVTVSDACKTTYEEIKNDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 209
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 210 GECRYGLFDFEYT 248
CRY ++D ++T
Sbjct: 65 --CRYAVYDHDFT 75
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 56.0 bits (129), Expect = 7e-09
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 FLRE*HQKMASGVTVSDACKTTYEEIKNDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 179
F+R H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+
Sbjct: 3 FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61
Query: 180 FLEDLQKGGTGECRYGLFDFEY 245
FL L + +CRY L+DF++
Sbjct: 62 FLASLPEN---DCRYALYDFDF 80
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 54.8 bits (126), Expect = 2e-08
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 30 ASGVTVSDACKTTYEEIKNDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 206
ASG+ V D CK ++E+K+ + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 207 TGECRYGLFDFEY 245
ECRY +FDF++
Sbjct: 326 ASECRYAVFDFDF 338
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 263 TSEASKKQKLFLMSGCPDTAKV 328
T E +K K+F +S PDT+KV
Sbjct: 340 TDENCQKSKIFFISWSPDTSKV 361
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 54.0 bits (124), Expect = 3e-08
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 30 ASGVTVSDACKTTYEEIKNDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 206
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 207 TGECRYGLFDFEY 245
ECRY +FDF++
Sbjct: 81 ADECRYAVFDFDF 93
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 263 TSEASKKQKLFLMSGCPDTAKV 328
T E +K K+F +S PDT++V
Sbjct: 95 TDENCQKSKIFFISWAPDTSRV 116
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 36 GVTVSDACKTTYEEIKNDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 212
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 213 ECRYGLFDFEY 245
ECRY ++D ++
Sbjct: 70 ECRYAVYDLDF 80
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 50.4 bits (115), Expect = 3e-07
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 39 VTVSDACKTTYEEIKNDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 215
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 216 CRYGLFDFEY 245
CRY +FD+++
Sbjct: 58 CRYAIFDYDF 67
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 46.4 bits (105), Expect = 5e-06
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 39 VTVSDACKTTYEEIKNDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGE 215
+ V + K+ + E+K K HRYV+F I D + +I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 216 CRYGLFDFEY 245
CRY ++D ++
Sbjct: 77 CRYAVYDLDF 86
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 33.9 bits (74), Expect = 0.031
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 39 VTVSDACKTTYEEIKNDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 194
+ V + K+ + E+ K HRYV+F I D + +I VE G Y+ F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 314 PGTPTSGRASVSC*PPTCPG 255
P TP G + +C PPT PG
Sbjct: 252 PSTPEYGTPATACPPPTAPG 271
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 66 TYEEIKNDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 212
T +++ D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
>05_07_0055 -
27374028-27374080,27374205-27374295,27374930-27375448,
27375544-27375779,27376363-27376846,27376993-27378282
Length = 890
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 75 LRKWSCKRPKLSHQTP 28
L +W C RPK H TP
Sbjct: 54 LEEWQCARPKTRHPTP 69
>04_03_0226 - 12977443-12977895
Length = 150
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 117 IRDEKQIDVETVGERNAEYEQFLEDLQKGG 206
+R+E +D+E G AE E+ DL+ GG
Sbjct: 112 MREEAAVDLEPGGGGGAEEEEAAVDLEPGG 141
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 253 WCVYSKSNRPYLHSPVPPFCRSSRNCSYSALRSP 152
W + K P L + P C N S SALR P
Sbjct: 4 WLIRPKPISPPLSAAKTPSCSCQANSSSSALRPP 37
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 171 YEQFLEDLQKGGTGECRYGLF 233
YE F EDL+ G E +GLF
Sbjct: 344 YELFNEDLRPGPVSEANWGLF 364
>06_01_0769 - 5745324-5746970
Length = 548
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 250 CVYSKSNRPYLHSPVPPFCRSSRN 179
C S P LHSP P CR+ R+
Sbjct: 501 CARPASVEPCLHSPPPLVCRARRD 524
>02_01_0497 +
3607227-3607462,3607600-3607661,3608138-3608286,
3608418-3608538,3608638-3608793,3609041-3609086,
3609414-3609480,3609553-3609629,3610180-3610249,
3610956-3611014,3611105-3611213,3611552-3611611,
3611701-3611763,3612007-3612131,3612260-3612422,
3612506-3612565,3612802-3612860,3613057-3613138,
3613227-3613290,3613506-3613573,3613648-3613758
Length = 668
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 217 HSPVPPFCRSSRNCSYSALRSPT 149
H PPF RS + S SA R PT
Sbjct: 337 HPAAPPFSRSPSSRSSSASRQPT 359
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 128 LVTDVEDNVTMLLVILDLFVSGLASVRNCHTRRH 27
LV+D + LVI +LF+ G + R+ +T +H
Sbjct: 687 LVSDAANTERPSLVINNLFIGGALAARSMYTLQH 720
>09_06_0099 -
20854828-20855117,20855231-20855423,20855507-20855668,
20856384-20856497
Length = 252
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 258 WPGA-CIQSQTGHICIPRY-RPSAD 190
WPGA C S+ G C+P+Y PS D
Sbjct: 39 WPGAYCTDSEYG-CCVPKYGYPSED 62
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 215 MQIWPV*L*IHAPGQGTSEASKKQKLFLMSGCPDTAK 325
+Q W + H+PGQG AS K ++ + G D +
Sbjct: 157 LQSWEKTMDCHSPGQGLMPASFKVRVVPLDGDDDVTE 193
>03_02_0197 +
6337212-6337278,6339261-6340517,6340599-6340626,
6340735-6340897
Length = 504
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 171 YEQFLEDLQKGGTGECRYGLFD 236
YE + ED + G T E +GLFD
Sbjct: 316 YELYDEDTRPGSTSEKYWGLFD 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,942,373
Number of Sequences: 37544
Number of extensions: 157629
Number of successful extensions: 539
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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