Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1782X
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12173-1|CAA78164.1| 552|Homo sapiens N-acetylglucosamine-6-sul... 29 2.6
BC012482-1|AAH12482.1| 552|Homo sapiens glucosamine (N-acetyl)-... 29 2.6
AK223484-1|BAD97204.1| 552|Homo sapiens glucosamine (N-acetyl)-... 29 2.6
DQ086814-1|AAY87165.1| 1586|Homo sapiens GLI-Kruppel transcripti... 29 3.5
AB209354-1|BAD92591.1| 1121|Homo sapiens GLI-Kruppel family memb... 29 3.5
AB007296-1|BAA25666.1| 1241|Homo sapiens hGLI2 protein. 29 3.5
AB007295-1|BAA25665.1| 1258|Homo sapiens hGLI2 protein. 29 3.5
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 29 4.6
BC051810-1|AAH51810.2| 430|Homo sapiens RELT tumor necrosis fac... 29 4.6
BC022876-1|AAH22876.1| 166|Homo sapiens cofilin 2 (muscle) prot... 29 4.6
BC022364-1|AAH22364.1| 166|Homo sapiens cofilin 2 (muscle) prot... 29 4.6
BC017279-1|AAH17279.1| 430|Homo sapiens tumor necrosis factor r... 29 4.6
BC011444-1|AAH11444.1| 166|Homo sapiens cofilin 2 (muscle) prot... 29 4.6
AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens ... 29 4.6
AK027899-1|BAB55441.1| 430|Homo sapiens protein ( Homo sapiens ... 29 4.6
AF319553-1|AAK77356.1| 430|Homo sapiens TNFRSF19L protein. 29 4.6
AF283513-1|AAF97934.1| 166|Homo sapiens muscle cofilin protein. 29 4.6
AF242299-1|AAF64498.1| 166|Homo sapiens cofilin 2b protein. 29 4.6
AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition part... 29 4.6
AF134803-1|AAD31281.1| 166|Homo sapiens cofilin isoform 2 protein. 29 4.6
AF134802-1|AAD31280.1| 166|Homo sapiens cofilin isoform 1 protein. 29 4.6
AF087867-1|AAM10495.1| 166|Homo sapiens cofilin isoform protein. 29 4.6
AK128835-1|BAC87635.1| 148|Homo sapiens protein ( Homo sapiens ... 28 8.0
AF070550-1|AAC28638.1| 342|Homo sapiens cote1 protein. 28 8.0
>Z12173-1|CAA78164.1| 552|Homo sapiens
N-acetylglucosamine-6-sulphatase protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 269 PTCPGLVRVFKVKQAISAFPGTALLQILEELFVFGVAFANRLDVDLFLVTDVEDNV 102
P PG +R + S P LL + L VFGVA R + L+TD +D V
Sbjct: 5 PLAPGRLRRGSPRHLPSCSPALLLLVLGGCLGVFGVAAGTRRPNVVLLLTDDQDEV 60
>BC012482-1|AAH12482.1| 552|Homo sapiens glucosamine
(N-acetyl)-6-sulfatase (Sanfilippo disease IIID)
protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 269 PTCPGLVRVFKVKQAISAFPGTALLQILEELFVFGVAFANRLDVDLFLVTDVEDNV 102
P PG +R + S P LL + L VFGVA R + L+TD +D V
Sbjct: 5 PLAPGRLRRGSPRHLPSCSPALLLLVLGGCLGVFGVAAGTRRPNVVLLLTDDQDEV 60
>AK223484-1|BAD97204.1| 552|Homo sapiens glucosamine
(N-acetyl)-6-sulfatase precursor variant protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 269 PTCPGLVRVFKVKQAISAFPGTALLQILEELFVFGVAFANRLDVDLFLVTDVEDNV 102
P PG +R + S P LL + L VFGVA R + L+TD +D V
Sbjct: 5 PLAPGRLRRGSPRHLPSCSPALLLLVLGGCLGVFGVAAGTRRPNVVLLLTDDQDEV 60
>DQ086814-1|AAY87165.1| 1586|Homo sapiens GLI-Kruppel transcription
factor GLI2 protein.
Length = 1586
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 241 NTRTRPGHVGG*QETEALPDVGVPGHR 321
N +PGH+G Q+TE PD G+R
Sbjct: 1272 NMPAKPGHLGHPQQTEVAPDPTTMGNR 1298
>AB209354-1|BAD92591.1| 1121|Homo sapiens GLI-Kruppel family member
GLI2 isoform beta variant protein.
Length = 1121
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 241 NTRTRPGHVGG*QETEALPDVGVPGHR 321
N +PGH+G Q+TE PD G+R
Sbjct: 807 NMPAKPGHLGHPQQTEVAPDPTTMGNR 833
>AB007296-1|BAA25666.1| 1241|Homo sapiens hGLI2 protein.
Length = 1241
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 241 NTRTRPGHVGG*QETEALPDVGVPGHR 321
N +PGH+G Q+TE PD G+R
Sbjct: 927 NMPAKPGHLGHPQQTEVAPDPTTMGNR 953
>AB007295-1|BAA25665.1| 1258|Homo sapiens hGLI2 protein.
Length = 1258
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 241 NTRTRPGHVGG*QETEALPDVGVPGHR 321
N +PGH+G Q+TE PD G+R
Sbjct: 944 NMPAKPGHLGHPQQTEVAPDPTTMGNR 970
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 57 CKTTYEEIKNDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDL 194
C Y +K +K Y+ + ++ D+ G +NAEY+++LE L
Sbjct: 145 CYLKYINLKASEKLDYITYLSIFDQLFDIPK-GRKNAEYKRYLEML 189
>BC051810-1|AAH51810.2| 430|Homo sapiens RELT tumor necrosis factor
receptor protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 285 CFLLASDVPWPGACIQSQTGHICIPRYRPSADP-RGT 178
CFL+ +PWP A + S T C P P DP +GT
Sbjct: 12 CFLML--LPWPLATLTSTTLWQCPPGEEPDLDPGQGT 46
>BC022876-1|AAH22876.1| 166|Homo sapiens cofilin 2 (muscle)
protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>BC022364-1|AAH22364.1| 166|Homo sapiens cofilin 2 (muscle)
protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>BC017279-1|AAH17279.1| 430|Homo sapiens tumor necrosis factor
receptor superfamily, member 19-like protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 285 CFLLASDVPWPGACIQSQTGHICIPRYRPSADP-RGT 178
CFL+ +PWP A + S T C P P DP +GT
Sbjct: 12 CFLML--LPWPLATLTSTTLWQCPPGEEPDLDPGQGT 46
>BC011444-1|AAH11444.1| 166|Homo sapiens cofilin 2 (muscle)
protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ90217 fis, clone MAMMA1002234, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 627
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 6 LRE*HQKMASGVTVSDACKTTYEEIKNDKKHRYVVFYIRDEKQID------VETVGERNA 167
LR HQ+ + + + CKT YE++ + V Y + ++I +G+++A
Sbjct: 197 LRFEHQEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSA 256
Query: 168 EYEQFLEDLQKGGT 209
E L+ GGT
Sbjct: 257 INELMQMRLRSGGT 270
>AK027899-1|BAB55441.1| 430|Homo sapiens protein ( Homo sapiens
cDNA FLJ14993 fis, clone Y79AA1001874, weakly similar to
OX40L RECEPTOR PRECURSOR. ).
Length = 430
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 285 CFLLASDVPWPGACIQSQTGHICIPRYRPSADP-RGT 178
CFL+ +PWP A + S T C P P DP +GT
Sbjct: 12 CFLML--LPWPLATLTSTTLWQCPPGEEPDLDPGQGT 46
>AF319553-1|AAK77356.1| 430|Homo sapiens TNFRSF19L protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 285 CFLLASDVPWPGACIQSQTGHICIPRYRPSADP-RGT 178
CFL+ +PWP A + S T C P P DP +GT
Sbjct: 12 CFLML--LPWPLATLTSTTLWQCPPGEEPDLDPGQGT 46
>AF283513-1|AAF97934.1| 166|Homo sapiens muscle cofilin protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>AF242299-1|AAF64498.1| 166|Homo sapiens cofilin 2b protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition
particle 68 protein.
Length = 619
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 6 LRE*HQKMASGVTVSDACKTTYEEIKNDKKHRYVVFYIRDEKQID------VETVGERNA 167
LR HQ+ + + + CKT YE++ + V Y + ++I +G+++A
Sbjct: 189 LRFEHQEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSA 248
Query: 168 EYEQFLEDLQKGGT 209
E L+ GGT
Sbjct: 249 INELMQMRLRSGGT 262
>AF134803-1|AAD31281.1| 166|Homo sapiens cofilin isoform 2 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>AF134802-1|AAD31280.1| 166|Homo sapiens cofilin isoform 1 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>AF087867-1|AAM10495.1| 166|Homo sapiens cofilin isoform protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Frame = +3
Query: 27 MASGVTVSDAC-----------KTTYEEIKNDKKHRYVVFYIRDEK-QIDVE-----TVG 155
MASGVTV+D +T EEIK K+ + V+F + D+K QI VE VG
Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTQEEIK--KRKKAVLFCLSDDKRQIIVEEAKQILVG 58
Query: 156 ERNAEYEQ-FLEDLQKGGTGECRYGLFDFEY 245
+ E + ++ +CRY L+D Y
Sbjct: 59 DIGDTVEDPYTSFVKLLPLNDCRYALYDATY 89
>AK128835-1|BAC87635.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46332 fis, clone TESTI4045470. ).
Length = 148
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 154 ANATPNT-NSSSRICRRAVPGNADMACL---TLNTRTRPG 261
A+ATP S+ CR+AVPG+ C T T+ RPG
Sbjct: 16 ASATPAPWPHRSQRCRQAVPGHPASGCCGTGTFRTQRRPG 55
>AF070550-1|AAC28638.1| 342|Homo sapiens cote1 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 312 GHPDIRKSFCFLLASDVPWPGACIQSQTGHICIPRYRP 199
G P +S C L PW G C +G + P +RP
Sbjct: 108 GAPTAARS-CHRLEGWPPWVGPCFSDSSGSLTPPGHRP 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,594,998
Number of Sequences: 237096
Number of extensions: 849942
Number of successful extensions: 2312
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2312
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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