Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1781
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070332-1|AAH70332.1| 376|Homo sapiens BRCTD1 protein protein. 32 1.7
BC025315-1|AAH25315.1| 654|Homo sapiens WD repeat domain 70 pro... 30 7.0
BC009648-1|AAH09648.1| 654|Homo sapiens WD repeat domain 70 pro... 30 7.0
AL512685-1|CAC21644.1| 674|Homo sapiens hypothetical protein pr... 30 7.0
AK001095-1|BAA91502.1| 654|Homo sapiens protein ( Homo sapiens ... 30 7.0
BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif dom... 30 9.3
BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif dom... 30 9.3
BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif dom... 30 9.3
BC065769-1|AAH65769.1| 363|Homo sapiens SAMD9 protein protein. 30 9.3
AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein. 30 9.3
AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein. 30 9.3
>BC070332-1|AAH70332.1| 376|Homo sapiens BRCTD1 protein protein.
Length = 376
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 267 ISFGKISLNFTKAKEFNDKNVK-KSPAGFGTFGRTPIQEQKEIEEIADDLESQHVEQVMG 443
++ G I + K ++F+ + K TFG + QKEI++ +D++ +
Sbjct: 294 VNVGSILIQHHKKEKFSGSSKDLKFVKMRNTFGSHTYENQKEIKKKDEDIQRSYT----- 348
Query: 444 IKNFGKKAKNFNLDELVEQAKKLHKK 521
++ KK K N + VEQ KK KK
Sbjct: 349 LRRKRKKGKESNCKKGVEQKKKKKKK 374
>BC025315-1|AAH25315.1| 654|Homo sapiens WD repeat domain 70
protein.
Length = 654
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 438 MGIKNFGKKAKNFNLDELVEQAKK 509
MG FGKKA+ F+L+ + EQ ++
Sbjct: 25 MGFTGFGKKARTFDLEAMFEQTRR 48
>BC009648-1|AAH09648.1| 654|Homo sapiens WD repeat domain 70
protein.
Length = 654
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 438 MGIKNFGKKAKNFNLDELVEQAKK 509
MG FGKKA+ F+L+ + EQ ++
Sbjct: 25 MGFTGFGKKARTFDLEAMFEQTRR 48
>AL512685-1|CAC21644.1| 674|Homo sapiens hypothetical protein
protein.
Length = 674
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 438 MGIKNFGKKAKNFNLDELVEQAKK 509
MG FGKKA+ F+L+ + EQ ++
Sbjct: 45 MGFTGFGKKARTFDLEAMFEQTRR 68
>AK001095-1|BAA91502.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ10233 fis, clone HEMBB1000266. ).
Length = 654
Score = 30.3 bits (65), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 438 MGIKNFGKKAKNFNLDELVEQAKK 509
MG FGKKA+ F+L+ + EQ ++
Sbjct: 25 MGFTGFGKKARTFDLEAMFEQTRR 48
>BC150249-1|AAI50250.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 387 EIEEIADDLESQHVEQVMGIKNFGKKAKNFNLDELVEQAKKLHKKPTKRGWKRN 548
+IEE+ +L +E + GK +KN D+ V Q ++ K+ K N
Sbjct: 66 QIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVSQKERRETSKQKQKGKEN 119
>BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 387 EIEEIADDLESQHVEQVMGIKNFGKKAKNFNLDELVEQAKKLHKKPTKRGWKRN 548
+IEE+ +L +E + GK +KN D+ V Q ++ K+ K N
Sbjct: 66 QIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVSQKERRETSKQKQKGKEN 119
>BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 387 EIEEIADDLESQHVEQVMGIKNFGKKAKNFNLDELVEQAKKLHKKPTKRGWKRN 548
+IEE+ +L +E + GK +KN D+ V Q ++ K+ K N
Sbjct: 66 QIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVSQKERRETSKQKQKGKEN 119
>BC065769-1|AAH65769.1| 363|Homo sapiens SAMD9 protein protein.
Length = 363
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 387 EIEEIADDLESQHVEQVMGIKNFGKKAKNFNLDELVEQAKKLHKKPTKRGWKRN 548
+IEE+ +L +E + GK +KN D+ V Q ++ K+ K N
Sbjct: 66 QIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVSQKERRETSKQKQKGKEN 119
>AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.
Length = 1589
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 387 EIEEIADDLESQHVEQVMGIKNFGKKAKNFNLDELVEQAKKLHKKPTKRGWKRN 548
+IEE+ +L +E + GK +KN D+ V Q ++ K+ K N
Sbjct: 66 QIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVSQKERRETSKQKQKGKEN 119
>AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.
Length = 1595
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 387 EIEEIADDLESQHVEQVMGIKNFGKKAKNFNLDELVEQAKKLHKKPTKRGWKRN 548
+IEE+ +L +E + GK +KN D+ V Q ++ K+ K N
Sbjct: 72 QIEELFKELRKTAIEDSIQTSKMGKPSKNAPKDQTVSQKERRETSKQKQKGKEN 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,569,421
Number of Sequences: 237096
Number of extensions: 1563345
Number of successful extensions: 2944
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2944
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -