Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1779X
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL731560-8|CAI40874.1| 1205|Homo sapiens potassium large conduct... 30 2.7
AL731560-7|CAI40872.1| 1166|Homo sapiens potassium large conduct... 30 2.7
AL731560-5|CAI40873.1| 1171|Homo sapiens potassium large conduct... 30 2.7
AL731556-8|CAI14079.1| 1205|Homo sapiens potassium large conduct... 30 2.7
AL731556-7|CAI14077.1| 1166|Homo sapiens potassium large conduct... 30 2.7
AL731556-5|CAI14078.1| 1171|Homo sapiens potassium large conduct... 30 2.7
AL627447-8|CAI16166.1| 1205|Homo sapiens potassium large conduct... 30 2.7
AL627447-7|CAI16168.1| 1166|Homo sapiens potassium large conduct... 30 2.7
AL627447-5|CAI16170.1| 1171|Homo sapiens potassium large conduct... 30 2.7
AL157833-8|CAI39734.1| 1205|Homo sapiens potassium large conduct... 30 2.7
AL157833-7|CAI39732.1| 1166|Homo sapiens potassium large conduct... 30 2.7
AL157833-5|CAI39733.1| 1171|Homo sapiens potassium large conduct... 30 2.7
AL731560-2|CAI40870.1| 1177|Homo sapiens potassium large conduct... 29 4.7
AL731560-1|CAI40871.1| 1209|Homo sapiens potassium large conduct... 29 4.7
AL731556-2|CAI14074.1| 1177|Homo sapiens potassium large conduct... 29 4.7
AL731556-1|CAI14072.1| 1209|Homo sapiens potassium large conduct... 29 4.7
AL627447-2|CAI16162.1| 1177|Homo sapiens potassium large conduct... 29 4.7
AL627447-1|CAI16164.1| 1209|Homo sapiens potassium large conduct... 29 4.7
AL157833-2|CAI39730.1| 1177|Homo sapiens potassium large conduct... 29 4.7
AL157833-1|CAI39731.1| 1209|Homo sapiens potassium large conduct... 29 4.7
U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein. 28 8.2
BC054500-1|AAH54500.1| 862|Homo sapiens sema domain, immunoglob... 28 8.2
AL929575-4|CAI43250.2| 862|Homo sapiens sema domain, immunoglob... 28 8.2
AL590233-3|CAI17379.2| 862|Homo sapiens sema domain, immunoglob... 28 8.2
AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein ... 28 8.2
>AL731560-8|CAI40874.1| 1205|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1166 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1205
>AL731560-7|CAI40872.1| 1166|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1166
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1127 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1166
>AL731560-5|CAI40873.1| 1171|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1171
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1132 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1171
>AL731556-8|CAI14079.1| 1205|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1166 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1205
>AL731556-7|CAI14077.1| 1166|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1166
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1127 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1166
>AL731556-5|CAI14078.1| 1171|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1171
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1132 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1171
>AL627447-8|CAI16166.1| 1205|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1166 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1205
>AL627447-7|CAI16168.1| 1166|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1166
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1127 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1166
>AL627447-5|CAI16170.1| 1171|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1171
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1132 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1171
>AL157833-8|CAI39734.1| 1205|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1166 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1205
>AL157833-7|CAI39732.1| 1166|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1166
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1127 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1166
>AL157833-5|CAI39733.1| 1171|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1171
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R R + + +KE+ YR
Sbjct: 1132 QSSSKKSSSVHSIPSTANRQNRPKSRESRDKQNRKEMVYR 1171
>AL731560-2|CAI40870.1| 1177|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1177
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1139 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1177
>AL731560-1|CAI40871.1| 1209|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1209
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1171 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1209
>AL731556-2|CAI14074.1| 1177|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1177
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1139 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1177
>AL731556-1|CAI14072.1| 1209|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1209
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1171 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1209
>AL627447-2|CAI16162.1| 1177|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1177
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1139 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1177
>AL627447-1|CAI16164.1| 1209|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1209
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1171 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1209
>AL157833-2|CAI39730.1| 1177|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1177
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1139 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1177
>AL157833-1|CAI39731.1| 1209|Homo sapiens potassium large conductance
calcium-activated channel, subfamily M, alpha membe
protein.
Length = 1209
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 169 QSSNPKNKSINTIPNLFERLTHKPCRPRKGAKKKKEIKYR 288
QSS+ K+ S+++IP+ R ++P K+KKE+ YR
Sbjct: 1171 QSSSKKSSSVHSIPSTANR-QNRPKSRESRDKQKKEMVYR 1209
>U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein.
Length = 862
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 68 MLASFIFHNNIKL*PFMYLVYIIYIPDPFSKFRSNLQIQKINPLTQF 208
+++ F+F + L F Y Y Y+P KFRS L I K P + F
Sbjct: 736 LMSLFLFFFVLFLCLFFYNCYKGYLPRQCLKFRSALLIGKKKPKSDF 782
>BC054500-1|AAH54500.1| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 68 MLASFIFHNNIKL*PFMYLVYIIYIPDPFSKFRSNLQIQKINPLTQF 208
+++ F+F + L F Y Y Y+P KFRS L I K P + F
Sbjct: 736 LMSLFLFFFVLFLCLFFYNCYKGYLPRQCLKFRSALLIGKKKPKSDF 782
>AL929575-4|CAI43250.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 68 MLASFIFHNNIKL*PFMYLVYIIYIPDPFSKFRSNLQIQKINPLTQF 208
+++ F+F + L F Y Y Y+P KFRS L I K P + F
Sbjct: 736 LMSLFLFFFVLFLCLFFYNCYKGYLPRQCLKFRSALLIGKKKPKSDF 782
>AL590233-3|CAI17379.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 68 MLASFIFHNNIKL*PFMYLVYIIYIPDPFSKFRSNLQIQKINPLTQF 208
+++ F+F + L F Y Y Y+P KFRS L I K P + F
Sbjct: 736 LMSLFLFFFVLFLCLFFYNCYKGYLPRQCLKFRSALLIGKKKPKSDF 782
>AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein
protein.
Length = 870
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 68 MLASFIFHNNIKL*PFMYLVYIIYIPDPFSKFRSNLQIQKINPLTQF 208
+++ F+F + L F Y Y Y+P KFRS L I K P + F
Sbjct: 744 LMSLFLFFFVLFLCLFFYNCYKGYLPRQCLKFRSALLIGKKKPKSDF 790
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,279,363
Number of Sequences: 237096
Number of extensions: 795051
Number of successful extensions: 1208
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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