Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1766
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...   118   3e-27
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...    91   6e-19
Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U51999-4|AAA96085.2|  627|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z19158-6|CAA79575.2|  615|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z19156-3|CAA79564.2|  615|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF079899-1|AAC83661.1|  615|Caenorhabditis elegans sodium- and c...    28   6.5  
U80454-5|AAB37877.1|  368|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score =  118 bits (285), Expect = 3e-27
 Identities = 46/87 (52%), Positives = 69/87 (79%)
 Frame = +1

Query: 256 LAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQA 435
           L WVNDCLQ++F KIE+L TGA YC F D LFP S+ +K++K+ + LE +++ N+K++Q 
Sbjct: 24  LMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVKWNSRLELDWLSNWKLVQT 83

Query: 436 GFKKMGVDKIVPIDKLVKGRFQDNLSF 516
            +K +GV+K++P+DKL+KG+FQDN  F
Sbjct: 84  TWKNLGVEKVIPVDKLIKGKFQDNFEF 110



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/28 (67%), Positives = 20/28 (71%)
 Frame = +3

Query: 486 EGSFPR*FEFLQWFKKFFDANYGGAAYD 569
           +G F   FEFLQWFKK FDANY G  YD
Sbjct: 101 KGKFQDNFEFLQWFKKLFDANYDGHEYD 128


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score = 91.1 bits (216), Expect = 6e-19
 Identities = 37/87 (42%), Positives = 62/87 (71%)
 Frame = +1

Query: 256 LAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQA 435
           +AWVN+ L+S+F K+EE+ +GAAYCQ   +LF  ++ +K++KF    E + + N+K+L  
Sbjct: 21  VAWVNNLLKSHFTKVEEMASGAAYCQLTHLLF-NAINLKKVKFNPRSEPDVLNNWKVLTT 79

Query: 436 GFKKMGVDKIVPIDKLVKGRFQDNLSF 516
            +K +G+DK V ++K+ K +FQDN+ F
Sbjct: 80  TWKDLGIDKPVDVEKMKKAKFQDNMEF 106



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
 Frame = +3

Query: 510 EFLQWFKKFFDANY--GGAAYDAVAHE-----KVCPWGTGARPPRGP 629
           EFLQWF KF++AN       YDAV              TG+RP   P
Sbjct: 105 EFLQWFYKFYNANLTTEPEEYDAVGARFGEDLPALKGSTGSRPVAAP 151


>Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical
           protein T09E11.10 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +1

Query: 337 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 447
           M M+F G  P K  I F +++   +HEY++ ++I  A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328


>U51999-4|AAA96085.2|  627|Caenorhabditis elegans Hypothetical
           protein C43H6.4 protein.
          Length = 627

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 49  IQTIATDKEKCVVYTCLYLIQRYREQIERNN 141
           ++ +  +K++CV YTCL  +   +EQ  +N+
Sbjct: 336 LEPMMDEKQRCVYYTCLAAVCPKKEQHHQNS 366


>Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical
           protein W07G1.2 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = -1

Query: 522 IAKTQIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDSFHW 364
           +  T ++ +  L  F +  YL+   +F   + YF +   +   ICLK   FHW
Sbjct: 14  LTPTTVLHDHRLRGFPDNIYLIVYGIFHLLIMYFVLKCAY---ICLKIRVFHW 63


>Z19158-6|CAA79575.2|  615|Caenorhabditis elegans Hypothetical
           protein T23G5.5 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 410 IYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAP-VHNSSIFAKFDWRQSFTHASY 252
           IY   +FV ++   +G  PGN     W  AAP +  S I + F   Q+ T+  Y
Sbjct: 491 IYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTYQDY 544


>Z19156-3|CAA79564.2|  615|Caenorhabditis elegans Hypothetical
           protein T23G5.5 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 410 IYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAP-VHNSSIFAKFDWRQSFTHASY 252
           IY   +FV ++   +G  PGN     W  AAP +  S I + F   Q+ T+  Y
Sbjct: 491 IYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTYQDY 544


>AF079899-1|AAC83661.1|  615|Caenorhabditis elegans sodium- and
           chloride-dependentantidepressant- and cocaine-sensitive
           dopamine transporterprotein.
          Length = 615

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 410 IYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAP-VHNSSIFAKFDWRQSFTHASY 252
           IY   +FV ++   +G  PGN     W  AAP +  S I + F   Q+ T+  Y
Sbjct: 491 IYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTYQDY 544


>U80454-5|AAB37877.1|  368|Caenorhabditis elegans Hypothetical
           protein T16A1.8 protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   FNAIEQFKKIYVSFTKFKLLLQTRKNVWFIHVYI*YKDI-VSKL 130
           FN ++Q   + V  ++F   LQ++KN + +H+     ++ +SKL
Sbjct: 45  FNEVQQDVSLIVRSSEFIFTLQSKKNYYDLHINFKLSNVKISKL 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,479,310
Number of Sequences: 27780
Number of extensions: 345844
Number of successful extensions: 989
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)