Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1763
(742 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 145 1e-34
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 145 1e-34
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 145 1e-34
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 145 1e-34
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 145 1e-34
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 142 9e-34
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 124 3e-28
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 31 3.3
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 31 3.3
AL772197-5|CAM15087.1| 711|Homo sapiens chromosome X open readi... 31 3.3
AL772197-4|CAH71713.1| 682|Homo sapiens chromosome X open readi... 31 3.3
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 31 3.3
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 31 3.3
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 145 bits (352), Expect = 1e-34
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 529 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRK 708
F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRK
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211
Query: 709 QLAQIKEMVEL 741
QLAQIKEMVEL
Sbjct: 212 QLAQIKEMVEL 222
Score = 136 bits (329), Expect = 8e-32
Identities = 60/87 (68%), Positives = 68/87 (78%)
Frame = +3
Query: 249 LAKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 428
L KGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 429 PIDDSVEGLTGNLFEVYLKPYFMEAYR 509
PIDD+VEG+TGNLFEVYLKPYF+EAYR
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYR 144
Score = 89.8 bits (213), Expect = 9e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +1
Query: 88 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 267
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 268 ARK 276
R+
Sbjct: 64 RRE 66
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 145 bits (352), Expect = 1e-34
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 529 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRK 708
F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRK
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211
Query: 709 QLAQIKEMVEL 741
QLAQIKEMVEL
Sbjct: 212 QLAQIKEMVEL 222
Score = 136 bits (329), Expect = 8e-32
Identities = 60/87 (68%), Positives = 68/87 (78%)
Frame = +3
Query: 249 LAKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 428
L KGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 429 PIDDSVEGLTGNLFEVYLKPYFMEAYR 509
PIDD+VEG+TGNLFEVYLKPYF+EAYR
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYR 144
Score = 89.8 bits (213), Expect = 9e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +1
Query: 88 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 267
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 268 ARK 276
R+
Sbjct: 64 RRE 66
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 145 bits (352), Expect = 1e-34
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 529 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRK 708
F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRK
Sbjct: 90 FLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 149
Query: 709 QLAQIKEMVEL 741
QLAQIKEMVEL
Sbjct: 150 QLAQIKEMVEL 160
Score = 126 bits (303), Expect = 1e-28
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +3
Query: 270 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 449
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 450 GLTGNLFEVYLKPYFMEAYR 509
G+TGNLFEVYLKPYF+EAYR
Sbjct: 63 GITGNLFEVYLKPYFLEAYR 82
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 145 bits (352), Expect = 1e-34
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 529 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRK 708
F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRK
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211
Query: 709 QLAQIKEMVEL 741
QLAQIKEMVEL
Sbjct: 212 QLAQIKEMVEL 222
Score = 136 bits (329), Expect = 8e-32
Identities = 60/87 (68%), Positives = 68/87 (78%)
Frame = +3
Query: 249 LAKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 428
L KGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 429 PIDDSVEGLTGNLFEVYLKPYFMEAYR 509
PIDD+VEG+TGNLFEVYLKPYF+EAYR
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYR 144
Score = 89.8 bits (213), Expect = 9e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +1
Query: 88 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 267
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 268 ARK 276
R+
Sbjct: 64 RRE 66
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 145 bits (352), Expect = 1e-34
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +1
Query: 529 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRK 708
F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRK
Sbjct: 152 FLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211
Query: 709 QLAQIKEMVEL 741
QLAQIKEMVEL
Sbjct: 212 QLAQIKEMVEL 222
Score = 136 bits (329), Expect = 8e-32
Identities = 60/87 (68%), Positives = 68/87 (78%)
Frame = +3
Query: 249 LAKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 428
L KGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 429 PIDDSVEGLTGNLFEVYLKPYFMEAYR 509
PIDD+VEG+TGNLFEVYLKPYF+EAYR
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYR 144
Score = 89.8 bits (213), Expect = 9e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +1
Query: 88 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 267
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 268 ARK 276
R+
Sbjct: 64 RRE 66
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 142 bits (345), Expect = 9e-34
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = +1
Query: 529 FMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRK 708
F+VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRK
Sbjct: 152 FLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRK 211
Query: 709 QLAQIKEMVEL 741
QLAQIKEMVEL
Sbjct: 212 QLAQIKEMVEL 222
Score = 136 bits (329), Expect = 8e-32
Identities = 60/87 (68%), Positives = 68/87 (78%)
Frame = +3
Query: 249 LAKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 428
L KGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 429 PIDDSVEGLTGNLFEVYLKPYFMEAYR 509
PIDD+VEG+TGNLFEVYLKPYF+EAYR
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYR 144
Score = 89.8 bits (213), Expect = 9e-18
Identities = 43/63 (68%), Positives = 56/63 (88%)
Frame = +1
Query: 88 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLRANA 267
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLL+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 268 ARK 276
R+
Sbjct: 64 RRE 66
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 124 bits (300), Expect = 3e-28
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 562 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEL 741
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVEL
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 31.5 bits (68), Expect = 3.3
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 676 VGYDDIGGCRKQLAQIKEMVE 738
V Y D+GGC++Q+ +++E+VE
Sbjct: 172 VTYSDVGGCKEQIEKLREVVE 192
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 31.5 bits (68), Expect = 3.3
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 676 VGYDDIGGCRKQLAQIKEMVE 738
V Y D+GGC++Q+ +++E+VE
Sbjct: 172 VTYSDVGGCKEQIEKLREVVE 192
>AL772197-5|CAM15087.1| 711|Homo sapiens chromosome X open reading
frame 23 protein.
Length = 711
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 564 ELDGAHAPADHEVSSRWIGGKPP*STASSILRIDCQ-*DPQLNHQ 433
++ G H+P DH V GGKPP + + R + + + +L HQ
Sbjct: 133 KVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQ 177
>AL772197-4|CAH71713.1| 682|Homo sapiens chromosome X open reading
frame 23 protein.
Length = 682
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 564 ELDGAHAPADHEVSSRWIGGKPP*STASSILRIDCQ-*DPQLNHQ 433
++ G H+P DH V GGKPP + + R + + + +L HQ
Sbjct: 133 KVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQ 177
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 31.5 bits (68), Expect = 3.3
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 676 VGYDDIGGCRKQLAQIKEMVE 738
V Y D+GGC++Q+ +++E+VE
Sbjct: 148 VTYSDVGGCKEQIEKLREVVE 168
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 31.5 bits (68), Expect = 3.3
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 676 VGYDDIGGCRKQLAQIKEMVE 738
V Y D+GGC++Q+ +++E+VE
Sbjct: 172 VTYSDVGGCKEQIEKLREVVE 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,539,380
Number of Sequences: 237096
Number of extensions: 2272844
Number of successful extensions: 4955
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4955
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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