Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1760
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   1.3  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   1.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.3  
EF588657-1|ABQ96843.1|  176|Anopheles gambiae transposase protein.     24   5.4  
EF588632-1|ABQ96822.1|  176|Anopheles gambiae transposase protein.     24   5.4  
EF588625-1|ABQ96815.1|  177|Anopheles gambiae transposase protein.     24   5.4  
EF588618-1|ABQ96809.1|  176|Anopheles gambiae transposase protein.     24   5.4  
EF588615-1|ABQ96806.1|  176|Anopheles gambiae transposase protein.     24   5.4  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 421 VNAARRYRLAGESRRFTINAIRVPMLRIKAMIIIQLLVC 305
           V+    YR +  +R+  I+  ++  LRI  +I++  +VC
Sbjct: 390 VDRTTYYRRSDTNRQRLIHKAKMKSLRISVVIVVAFVVC 428


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 421 VNAARRYRLAGESRRFTINAIRVPMLRIKAMIIIQLLVC 305
           V+    YR +  +R+  I+  ++  LRI  +I++  +VC
Sbjct: 391 VDRTTYYRRSDTNRQRLIHKAKMKSLRISVVIVVAFVVC 429


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 197 SVSPSYGKSTVS*QCSSWLRLHCGCIYVC*ARTNI 301
           SV+PSYG      QC      HC C+    AR +I
Sbjct: 392 SVAPSYGLPQQQNQCPIHRIQHCTCMLQNNARESI 426


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 628 ERRLRNGSVHRRRDILQHVPRLRHAPD 708
           E + R  +VH  RD++Q   RL+   D
Sbjct: 367 ESKKRGSNVHLERDLVQEYDRLKQKAD 393


>EF588657-1|ABQ96843.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 329 DHH-PIIGVYKCLYGLNKHKYSR 264
           DH  P+    KCLYGL   KY++
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYTK 35


>EF588632-1|ABQ96822.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 329 DHH-PIIGVYKCLYGLNKHKYSR 264
           DH  P+    KCLYGL   KY++
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYNK 35


>EF588625-1|ABQ96815.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 329 DHH-PIIGVYKCLYGLNKHKYSR 264
           DH  P+    KCLYGL   KY++
Sbjct: 14  DHFSPVETGAKCLYGLKVFKYTK 36


>EF588618-1|ABQ96809.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 329 DHH-PIIGVYKCLYGLNKHKYSR 264
           DH  P+    KCLYGL   KY++
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYTK 35


>EF588615-1|ABQ96806.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 329 DHH-PIIGVYKCLYGLNKHKYSR 264
           DH  P+    KCLYGL   KY++
Sbjct: 13  DHFSPVETGAKCLYGLKVFKYTK 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,323
Number of Sequences: 2352
Number of extensions: 17971
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)