Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1759
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.20 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.4  
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    24   5.8  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   7.6  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   7.6  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   7.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 428  RFPNGPRVPSALWYAFCLQVSTRYQSKPSASFNDSGSSL 312
            +F + PR+ +A  Y +C+ ++  Y   PSAS     SSL
Sbjct: 3174 KFESNPRIENADHYKYCMPLT--YDGHPSASCEGEWSSL 3210


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +2

Query: 146 RGLPRTLHTGPGTTTYP-NWKMNERWTGPMDRWTTE 250
           +G PR L     + T P +WK N  W G    + TE
Sbjct: 161 KGGPRPLWQLYDSPTLPESWKFNSTWLGLATTYGTE 196


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +2

Query: 146 RGLPRTLHTGPGTTTYP-NWKMNERWTGPMDRWTTE 250
           +G PR L     + T P +WK N  W G    + TE
Sbjct: 161 KGGPRPLWQLYDSPTLPESWKFNSTWLGLATTYGTE 196


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 240 GPLSLTFDGTQEAYSQLAKENKDPQRRSAVV 332
           GPL++T DG Q     L+   K  Q R  +V
Sbjct: 211 GPLTVTIDGEQMQIGVLSYGEKPCQARLPIV 241


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 240 HRSIGPVQRSFIFQLGYVVV--PGPVCSVLGSPRPRHD 133
           +++IGPV R+F   L YV +   G    V  + + R D
Sbjct: 194 YKAIGPVIRNFKLTLTYVTLLFAGDATGVFDTRKDRDD 231


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 603 FHKLEGNSDTRLQFNIILYAN 541
           F+  +GN + R + N+++Y N
Sbjct: 116 FNNADGNYEVRYKSNVLIYPN 136


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 697 TTRRNSTSPETTSHSATHIDR 635
           ++ RNS+S   +S S TH DR
Sbjct: 46  SSSRNSSSCNNSSSSGTHSDR 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,392
Number of Sequences: 2352
Number of extensions: 20262
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)