Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1759
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical pr...    43   3e-04
Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical pr...    41   8e-04
Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical pr...    41   8e-04
Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical pr...    36   0.031
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    30   2.0  
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...    29   3.5  
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        29   3.5  
U80837-7|AAB37907.1|  760|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p4...    28   8.1  

>Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical
           protein W02B12.3c protein.
          Length = 150

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +3

Query: 9   RYGPPTRTEYRLIVENLSSRISWQV 83
           RYG P  T +R++VENLSSRISWQV
Sbjct: 120 RYGRPYSTRHRVVVENLSSRISWQV 144


>Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical
           protein W02B12.3b protein.
          Length = 148

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +3

Query: 9   RYGPPTRTEYRLIVENLSSRISWQ 80
           RYG P  T +R++VENLSSRISWQ
Sbjct: 120 RYGRPYSTRHRVVVENLSSRISWQ 143


>Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical
           protein W02B12.3a protein.
          Length = 312

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +3

Query: 9   RYGPPTRTEYRLIVENLSSRISWQ 80
           RYG P  T +R++VENLSSRISWQ
Sbjct: 120 RYGRPYSTRHRVVVENLSSRISWQ 143


>Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical
           protein W02B12.2 protein.
          Length = 281

 Score = 35.9 bits (79), Expect = 0.031
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 9   RYGPPTRTEYRLIVENLSSRISWQ 80
           RY  P  T +RL+++NLS+R SWQ
Sbjct: 103 RYSRPCSTRFRLVIDNLSTRYSWQ 126


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 584 TLILDYNLTLYYMQTLANVMFKLSMFYGL 498
           T++L Y   ++ M  +AN+  +L MF+G+
Sbjct: 58  TILLGYIYCIHIMDNIANITMRLDMFFGI 86


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 15  GPPTRTEYRLIVENLSSRISWQ 80
           GP  RT YR+IVE L    SWQ
Sbjct: 116 GPQRRTGYRVIVEGLPPTGSWQ 137


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 15  GPPTRTEYRLIVENLSSRISWQ 80
           GP  RT YR+IVE L    SWQ
Sbjct: 116 GPQRRTGYRVIVEGLPPTGSWQ 137


>U80837-7|AAB37907.1|  760|Caenorhabditis elegans Hypothetical
           protein F07E5.8 protein.
          Length = 760

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -2

Query: 551 YMQTLANVMFKLSMFYGL*TFDLLLLKQVISIVLNIRLMWSRFPN---GPRVPSAL 393
           +M  +AN+ + LS F  + TFD  L+K+      +IR + S  PN    PR P  L
Sbjct: 310 FMHRIANISYWLSDFGNVSTFD-SLIKKTTKACGSIRYVNSDIPNFEYKPRFPQKL 364


>AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p450
           family protein 34A6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 491 FDLLLLKQVISIVLNIRLMWSRFPNGP 411
           F L+L   V+ + +NI   W + PNGP
Sbjct: 3   FILILTATVLILTVNIWRAWRKLPNGP 29


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,362,109
Number of Sequences: 27780
Number of extensions: 404589
Number of successful extensions: 1022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)