Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1758
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 58 1e-08
U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024791-3|AAF60673.1| 468|Caenorhabditis elegans Hypothetical ... 29 3.1
U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (gr... 29 5.4
U34596-1|AAA97605.1| 570|Caenorhabditis elegans SMA-4 protein. 28 7.2
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 28 7.2
U00066-5|AAA50739.2| 565|Caenorhabditis elegans Small protein 4... 28 7.2
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 28 9.5
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 28 9.5
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1373 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1429
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1430 KTNSVDVTVGPRACLNCPLTVDGSR 1454
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1457 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1499
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1407 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1463
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1464 KTNSVDVTVGPRACLNCPLTVDGSR 1488
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1491 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1533
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1344 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1400
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1401 KTNSVDVTVGPRACLNCPLTVDGSR 1425
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1428 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1470
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1478 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1534
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1535 KTNSVDVTVGPRACLNCPLTVDGSR 1559
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1562 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1604
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1373 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1429
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1430 KTNSVDVTVGPRACLNCPLTVDGSR 1454
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1457 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1499
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1407 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1463
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1464 KTNSVDVTVGPRACLNCPLTVDGSR 1488
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1491 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1533
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1344 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1400
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1401 KTNSVDVTVGPRACLNCPLTVDGSR 1425
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1428 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1470
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1478 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1534
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1535 KTNSVDVTVGPRACLNCPLTVDGSR 1559
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1562 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1604
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical protein
F45E10.1e protein.
Length = 1234
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1058 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1114
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1115 KTNSVDVTVGPRACLNCPLTVDGSR 1139
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1142 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSEKWPW 1184
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 HFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPA-LATVLEWLPGVWSTLNAFLE 429
+F+ + +N +E GF+ RYLRR+ E RL + P+ L ++++ P +N F+E
Sbjct: 1407 NFKMSVMSNRLE---GFILRYLRRRAVEDEYRLTVQMPSELFKIIDFFPIALQAVNNFIE 1463
Query: 430 AHSSSDVTVGPRLFLACPMDLEASQ 504
+S DVTVGPR L CP+ ++ S+
Sbjct: 1464 KTNSVDVTVGPRACLNCPLTVDGSR 1488
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 510 FADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPW 641
F +WN + +PY R+G +GR + DP + +PW
Sbjct: 1491 FIRLWNENFIPYLERVARDGKKTFGRCT-SFEDPTDIVSKKWPW 1533
>U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical
protein F58F9.9 protein.
Length = 286
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 499 SQACSRTCGITA*CRTLRK-QSEKGSRCTVGGDTLRSIPCNT*KHLILGENQT--IPY 663
++ C CG A RK S C GDT R IPCNT K + +T IPY
Sbjct: 39 TKPCPTNCGSCAKILYTRKCLSTNIPNCACVGDTTRYIPCNT-KTCVYPAQRTCCIPY 95
>AC024791-3|AAF60673.1| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.13 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 110 QRKVAALPRRSPLRCTVRRCSLDTH 36
++K+ + RR PLR T+R CS++ H
Sbjct: 184 KKKLRPMRRRIPLRGTIRYCSMNVH 208
>U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (grd
related) protein12 protein.
Length = 186
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +3
Query: 105 PLLCSTTCNMRLLWETLSPDCCRPTIGTCPSL*EQCLKRRVIQLISNYTTLQVAPHCK 278
P C TTC + SP C T GTC +RR + ++SN T VA H K
Sbjct: 37 PSTCPTTCLPIMTCTPPSPPACCNTCGTCNGK----RRRRHLTMLSNAT--YVADHEK 88
>U34596-1|AAA97605.1| 570|Caenorhabditis elegans SMA-4 protein.
Length = 570
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 458 PTVTSLEECASRNAFNVDQTPGSHSN 381
PT+++L+E +S N F + P S++N
Sbjct: 76 PTISTLDEASSFNGFLIPSQPSSYNN 101
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 68 TAAATGEEAPLPSVVVLDNLQHASALGDAFAGLLP 172
T A T AP+ S L NL +A+A+ A AG+ P
Sbjct: 546 TGAPTQTAAPIVSQQQLSNLPNAAAMAAAAAGMRP 580
>U00066-5|AAA50739.2| 565|Caenorhabditis elegans Small protein 4,
isoform a protein.
Length = 565
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 458 PTVTSLEECASRNAFNVDQTPGSHSN 381
PT+++L+E +S N F + P S++N
Sbjct: 71 PTISTLDEASSFNGFLIPSQPSSYNN 96
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical protein
F57C7.1b protein.
Length = 1087
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 772 AANYSGNQSQDSDNASMDSN 831
+A+ +GNQS DSD+AS DS+
Sbjct: 985 SASRTGNQSSDSDSASDDSS 1004
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
F57C7.1a protein.
Length = 1209
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 772 AANYSGNQSQDSDNASMDSN 831
+A+ +GNQS DSD+AS DS+
Sbjct: 985 SASRTGNQSSDSDSASDDSS 1004
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = -1
Query: 190 HVPIVGRQQSGESVSQSR--RMLQVVEHNNGR*RRFLAG--RRCGALFGDVR-*IRTQLV 26
+ P++ + V++S+ R+L + H+N RRF+AG R GA+F ++ +R QL
Sbjct: 88 YTPVILNASTTNIVTRSKFYRLLFSIAHHNIPIRRFMAGELRLLGAVFSCLKASLREQLG 147
Query: 25 TRFPIDI 5
+ IDI
Sbjct: 148 PQNMIDI 154
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 141 LWETLSPDCCRPTIGTC 191
+W TL DCCR I +C
Sbjct: 219 IWNTLERDCCRGCIDSC 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,390,032
Number of Sequences: 27780
Number of extensions: 410675
Number of successful extensions: 1188
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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