Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1756X
         (367 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022782-1|AAH22782.1|  780|Homo sapiens bromo adjacent homology...    28   8.0  
AB023162-1|BAA76789.2|  797|Homo sapiens KIAA0945 protein protein.     28   8.0  

>BC022782-1|AAH22782.1|  780|Homo sapiens bromo adjacent homology
           domain containing 1 protein.
          Length = 780

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -3

Query: 278 LLSRPNQFIGDNRIQHPPW-STLCCLRDD*MISSD*FCTKDSLLLTYLGLHCILSCHYNL 102
           LL  P+        QHPPW S+  C  +D  ++    C    L +T+ G  C   C Y +
Sbjct: 415 LLLAPSSVPSGTPFQHPPWGSSRYCSSEDTGVNGYSICGVLPLSVTHAGTTC-GGCPYKM 473


>AB023162-1|BAA76789.2|  797|Homo sapiens KIAA0945 protein protein.
          Length = 797

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -3

Query: 278 LLSRPNQFIGDNRIQHPPW-STLCCLRDD*MISSD*FCTKDSLLLTYLGLHCILSCHYNL 102
           LL  P+        QHPPW S+  C  +D  ++    C    L +T+ G  C   C Y +
Sbjct: 433 LLLAPSSVPSGTPFQHPPWGSSRYCSSEDTGVNGYSICGVLPLSVTHAGTTC-GGCPYKM 491


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,703,437
Number of Sequences: 237096
Number of extensions: 861620
Number of successful extensions: 1133
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)